Co-expression analysis

Gene ID Zm.1546.2.S1_a_at
Gene name hypothetical protein LOC100278775
Homology with ArabidopsisSimilar to At1g15270: - (HF=3e-4)
Module size 6 genes
NF 0.80
%ile 97.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.1546.2.S1_a_atCB411210hypothetical protein LOC100278775-3e-4At1g15270-O.I.H.G.S.X.
0.9199.00.96Zm.15590.1.A1_atCD448259hypothetical protein LOC100277246-1e+0At1g48730unknown proteinO.I.H.G.S.X.
0.7792.10.95Zm.19031.1.A1_atBU051425--2e-5At2g01730ATCPSF73-II (cleavage and polyadenylation specificity factor 73 kDa subunit-II)O.I.H.G.S.X.
0.7792.10.96Zm.10226.1.A1_atBM332464--4e+0At2g13720ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)O.I.H.G.S.X.
0.6785.80.96Zm.19030.1.A1_atAW179359hypothetical protein LOC100279586-1e-1At1g63855unknown proteinO.I.H.G.S.X.
0.5369.10.95Zm.2925.2.S1_atBG836389--4e-63At2g47110UBQ6O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.4GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
4.496.2GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
3.795.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.194.3GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
2.993.8GSM206313Upper pulvinus 5 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.793.2GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
2.692.9GSM205431Mo17 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
2.592.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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