Co-expression analysis

Gene ID Zm.15439.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g31820: ankyrin repeat family protein (HF=3e-3)
Module size 7 genes
NF 0.42
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.85Zm.15439.1.A1_atCD219438--3e-3At2g31820ankyrin repeat family proteinO.I.H.G.S.X.
0.4861.30.77Zm.10154.1.A1_atAY110895.1hypothetical protein LOC100272270-2e+1At5g63230-O.I.H.G.S.X.
0.4455.70.81Zm.607.1.A1_atAF326495.1plasma membrane integral protein ZmPIP2-6-2e-25At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.4455.70.87Zm.2000.1.A1_atAY110879.1--4e+0At1g73885unknown proteinO.I.H.G.S.X.
0.4455.70.90Zm.12050.1.A1_atBM416823early flowering 4-1e+0At5g16030unknown proteinO.I.H.G.S.X.
0.3336.00.84Zm.18984.1.A1_atCO518220hypothetical protein LOC100279220-2e+0At3g13140hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1912.80.84Zm.15298.1.A1_atBQ538208--1e+0At5g63740zinc finger protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.297.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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