Co-expression analysis

Gene ID	Zm.15437.1.S1_at
Gene name	hypothetical protein LOC100191830
Homology with Arabidopsis	Similar to At5g37670: 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) (HF=6e+0)
Module size	6 genes
NF	0.61
%ile	82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.97	Zm.15437.1.S1_at	CD219447	hypothetical protein LOC100191830	-	6e+0	At5g37670	15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	ZmAffx.757.1.A1_at	AI745972	-	-	3e+0	At4g32960	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	ZmAffx.834.1.A1_at	AI770566	-	-	8e-1	At1g54420	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.15414.1.A1_at	CD435566	-	-	5e+0	At4g01170	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.1342.1.S1_at	BG842254	-	-	4e-5	At1g23230	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.98	Zm.13366.1.A1_a_at	CF634270	-	-	3e-1	At3g45960	ATEXLA3 (arabidopsis thaliana expansin-like a3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

A co-expression module including the grape gene, 1607608_at, orthologous to the query gene, Zm.15437.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	1607608_at	At5g37670	hypothetical protein LOC100251222	-	3e-1	At5g58800	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	1617299_at	At5g37670	hypothetical protein LOC100249941	-	3e-31	At2g46225	ABIL1 (Abi-1-like 1)	O.I.	H.G.	S.X.	Please select
0.29	37.7	1606907_at	At5g37670	hypothetical protein LOC100241220	-	7e-28	At3g54440	glycoside hydrolase family 2 protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	1614475_at	At5g37670	hypothetical protein LOC100263178	-	9e-18	At5g43930	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	1612192_s_at	At5g37670	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	8e-86	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.21	24.0	1622075_at	At5g37670	-	-	2e-16	At5g20990	B73	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

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