Co-expression analysis

Gene ID	Zm.15414.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g01170: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.43
%ile	50.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.97	Zm.15414.1.A1_at	CD435566	-	-	5e+0	At4g01170	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.15437.1.S1_at	CD219447	hypothetical protein LOC100191830	-	6e+0	At5g37670	15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	ZmAffx.757.1.A1_at	AI745972	-	-	3e+0	At4g32960	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.1342.1.S1_at	BG842254	-	-	4e-5	At1g23230	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.18465.1.A1_at	CO530071	-	-	1e+1	At4g09100	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.98	Zm.1782.1.A1_at	BQ538858	hypothetical protein LOC100273445	-	2e+0	At5g60970	TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.1	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.0	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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