| Gene ID | Zm.15390.1.A1_at |
| Gene name | hypothetical protein LOC100280068 |
| Homology with Arabidopsis | Similar to At5g19740: peptidase M28 family protein (HF=4e-7) |
| Module size | 6 genes |
| NF | 0.10 |
| %ile | 6.2 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.56 | 74.4 | 0.98 | Zm.15390.1.A1_at | BM267333 | hypothetical protein LOC100280068 | - | 4e-7 | At5g19740 | peptidase M28 family protein | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.98 | Zm.16969.1.A1_at | CF972346 | developmentally-regulated GTP-binding protein 2 | - | 2e-56 | At1g17470 | ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.13 | 6.8 | 0.98 | Zm.19201.2.S1_a_at | CO526388 | hypothetical protein LOC100216991 | - | 2e+0 | At5g39650 | unknown protein | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.98 | Zm.12878.1.S1_at | CA400963 | - | - | 9e-3 | At5g11560 | catalytic | O.I. | H.G. | S.X. | |
| 0.10 | 4.6 | 0.98 | Zm.12093.1.A1_at | BM349818 | - | - | 6e+0 | At3g24100 | - | O.I. | H.G. | S.X. | |
| 0.03 | 1.1 | 0.98 | Zm.2098.1.S1_at | AY105824.1 | oleosin1 | - | 2e+0 | At2g47780 | rubber elongation factor (REF) protein-related | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.2 | 98.9 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.1 | 98.8 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.1 | 98.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.6 | 98.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.4 | 98.7 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.9 | 98.6 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.7 | 98.6 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.7 | 98.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.6 | 92.9 | GSM320456 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.40 | 51.1 | Os01g0743300 | At5g19740 | - | Protease-associated PA domain containing protein | 2e-2 | At3g54720 | AMP1 (ALTERED MERISTEM PROGRAM 1) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os02g0150700 | At5g19740 | - | Zn-finger, RING domain containing protein | 5e-3 | At5g10650 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os04g0590400 | At5g19740 | - | GRAS transcription factor domain containingprotein | 6e-6 | At1g07520 | scarecrow transcription factor family protein | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os01g0347100 | At5g19740 | - | Protein of unknown function DUF1399 family protein | 5e-3 | At1g56230 | unknown protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os06g0251200 | At5g19740 | - | MATH domain containing protein | 1e+0 | At5g46530 | - | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os01g0235300 | At5g19740 | - | SOUL heme-binding protein family protein | 8e+0 | At5g41440 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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