Co-expression analysis

Gene ID	Zm.15283.1.A1_at
Gene name	calcium-dependent protein kinase, isoform AK1
Homology with Arabidopsis	Similar to At3g57530: CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) (HF=2e-16)
Module size	6 genes
NF	0.16
%ile	11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.15283.1.A1_at	CO532462	calcium-dependent protein kinase, isoform AK1	-	2e-16	At3g57530	CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.99	ZmAffx.517.1.A1_at	AI711601	Hypothetical protein LOC100193129	-	8e-1	At4g10290	-	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.99	Zm.3640.1.A1_at	AY111661.1	hypothetical protein LOC100277622	-	4e+0	At5g56865	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.99	Zm.5048.2.S1_a_at	BM074541	endoplasmin	-	3e-34	At4g24190	SHD (SHEPHERD)	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.99	Zm.1968.1.A1_at	CF244101	MGD2	-	1e-20	At2g11810	MGDC	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.99	Zm.3153.3.S1_a_at	CF624577	B12D protein	-	1e-3	At1g20440	COR47 (COLD-REGULATED 47)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.9	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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