Co-expression analysis

Gene ID	Zm.1527.2.A1_a_at
Gene name	xyloglucan endotransglucosylase/hydrolase protein 23
Homology with Arabidopsis	Similar to At5g51790: basix helix-loop-helix (bHLH) family protein (HF=1e+0)
Module size	6 genes
NF	0.13
%ile	8.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.82	Zm.1527.2.A1_a_at	BM078218	xyloglucan endotransglucosylase/hydrolase protein 23	-	1e+0	At5g51790	basix helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.96	Zm.13376.1.S1_s_at	X85805.1	plasma-membrane H+ATPase2 /// proton-exporting ATPase	-	2e-95	At4g30190	AHA2	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.95	Zm.3271.1.A1_at	BU645176	hypothetical protein AY106026 /// hypothetical protein LOC100194361	-	7e-15	At1g76860	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.10261.1.S1_at	AY112633.1	-	-	1e-17	At3g47460	ATSMC2	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.5239.1.A1_at	BQ539247	-	-	1e+0	At1g24880	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.92	Zm.17472.1.S1_at	CK368086	-	-	6e+0	At5g05050	peptidase C1A papain family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.6	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320444	protocol: mRNA - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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