Co-expression analysis

Gene ID	Zm.15248.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g52420: unknown protein (HF=1e+0)
Module size	7 genes
NF	0.18
%ile	12.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.94	Zm.15248.1.A1_at	BM074646	-	-	1e+0	At5g52420	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.95	Zm.5515.1.A1_at	CF631927	-	-	3e+0	At2g01580	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.96	Zm.14055.1.A1_at	AY107585.1	-	-	6e+0	At5g59340	WOX2 (WUSCHEL RELATED HOMEOBOX 2)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	Zm.17527.1.A1_at	CO534103	hypothetical protein LOC100272457	-	2e+1	At5g51520	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.18544.1.A1_at	CK826617	-	-	1e-1	At4g24900	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.95	Zm.17751.1.S1_at	CK371154	-	-	1e+0	At1g14210	ribonuclease T2 family protein	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.95	Zm.18469.1.S1_at	BM378527	oxidoreductase	-	2e-7	At4g13250	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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