Co-expression analysis

Gene ID Zm.15215.1.A1_at
Gene name Hypothetical protein LOC100193843
Homology with ArabidopsisSimilar to At5g22870: harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (HF=1e+0)
Module size 6 genes
NF 0.38
%ile 41.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.97Zm.15215.1.A1_atBM332652Hypothetical protein LOC100193843-1e+0At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.5065.70.98Zm.5012.1.A1_atCK849978auxin response factor 75-9e-1At3g45050unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.18992.1.A1_atCO521210--4e-1At5g20370serine-rich protein-relatedO.I.H.G.S.X.
0.3538.90.97Zm.18946.1.A1_atBM338625hypothetical protein LOC100278262-1e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3029.80.97Zm.9542.1.A1_atCF624708hypothetical protein LOC100192045-3e-16At4g16170unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.3775.1.A1_atAY103856.1chaperonin-3e-5At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.80.97Zm.18541.1.S1_atCO528387hypothetical protein ache-3e-3At3g26430GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6077.80.96Zm.6501.1.A1_atCD441294--1e-1At2g46640unknown proteinO.I.H.G.S.X.
0.5267.30.97ZmAffx.122.1.A1_atAI665696hypothetical protein LOC100217096-8e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.5065.70.96Zm.14383.1.A1_atAY109259.1--1e+0At2g33780VQ motif-containing proteinO.I.H.G.S.X.
0.5065.70.96Zm.3492.1.A1_atBG550327hypothetical protein LOC100275578-2e-1At1g16490MYB58 (MYB DOMAIN PROTEIN 58)O.I.H.G.S.X.
0.4251.30.96Zm.12531.1.A1_atAI740174--2e+0At3g27328unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.9322.1.A1_atBM338181--6e+0At5g43070WPP1 (WPP domain protein 1)O.I.H.G.S.X.
0.4048.50.97Zm.13515.1.A1_atBI674748R2R3MYB-domain protein-8e-17At4g38620MYB4O.I.H.G.S.X.
0.4048.50.97Zm.5834.1.A1_a_atBM335098--6e+0At4g01260transcription regulatorO.I.H.G.S.X.
0.4048.50.98Zm.13427.1.S1_atAF124738.1hypothetical protein LOC100194389-1e-7At4g21520transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3641.30.97Zm.484.1.A1_atAF136827.1elongation factor 1 alpha-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.3641.30.98Zm.17192.1.A1_atBM339467--5e+0At2g22520unknown proteinO.I.H.G.S.X.
0.3538.90.96Zm.15359.1.S1_atCO531510--2e+0At2g05260lipase class 3 family proteinO.I.H.G.S.X.
0.3538.90.97Zm.5948.1.A1_atCD994991hypothetical protein LOC100191184-1e+1At5g22220-O.I.H.G.S.X.
0.3538.90.94Zm.6633.1.A1_atAY108873.1hypothetical protein LOC100273911-8e-5At1g14380IQD28 (IQ67 DOMAIN PROTEIN 28)O.I.H.G.S.X.
0.3336.00.97Zm.17443.1.A1_atCK347379--5e+0At4g14100transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.3336.00.97Zm.15048.1.A1_atAY111552.1--5e+0At5g14750ATMYB66 (MYB DOMAIN PROTEIN 66)O.I.H.G.S.X.
0.3131.60.96Zm.13640.1.A1_atCK348107--3e+0At2g35600BRXL1 (BREVIS RADIX LIKE 1)O.I.H.G.S.X.
0.3131.60.96Zm.5419.1.A1_atAW506712phosphatidate cytidylyltransferase-6e-18At1g62430ATCDS1O.I.H.G.S.X.
0.2928.10.94Zm.6634.1.A1_atAI629925--3e-2At2g33720transcription factorO.I.H.G.S.X.
0.2928.10.95Zm.6887.1.A1_atAI065555hypothetical protein LOC100194370-1e+0At3g25940transcription factor S-II (TFIIS) domain-containing proteinO.I.H.G.S.X.
0.2928.10.96Zm.10219.1.S1_atCK368359Hypothetical LOC542286-2e-10At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.2724.60.94Zm.18091.1.A1_atBQ538837--7e-6At1g22430alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.2724.60.95Zm.4237.1.A1_atBQ172467hypothetical protein LOC100192473-2e+0At1g54830NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)O.I.H.G.S.X.
0.2724.60.95Zm.8926.2.S1_atBM350553Hypothetical protein LOC100192920-3e-1At4g15150glycine-rich proteinO.I.H.G.S.X.
0.2724.60.95Zm.9263.1.A1_atBM347538--2e+0At1g64405unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.17174.1.A1_atCO531239hypothetical protein LOC100273979-2e-6At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)O.I.H.G.S.X.
0.2724.60.96Zm.12717.1.S1_atAF543417.1hypothetical protein LOC100192941 /// major facilitator superfamily antiporter-3e-3At1g17970zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2724.60.96Zm.18402.1.A1_atCF2436464,5-DOPA dioxygenase extradiol-1e+1At5g60142DNA bindingO.I.H.G.S.X.
0.2724.60.97Zm.11551.1.A1_atAY108861.11-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imi dazole-4-carboxamide isomerase-4e-1At4g17960unknown proteinO.I.H.G.S.X.
0.2724.60.97Zm.14429.4.A1_atCK827265RALF-6e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.2724.60.97Zm.17990.1.S1_atBG837629hypothetical protein LOC100275286-2e+0At5g54460wound-responsive protein-relatedO.I.H.G.S.X.
0.2521.30.96Zm.17917.1.A1_atCF629332--6e+0At4g13220unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.4967.1.A1_atCF043925initiator-binding protein-2e-12At3g46590TRFL1 (TRF-LIKE 1)O.I.H.G.S.X.
0.2521.30.97Zm.17284.1.S1_atCO521050hypothetical protein LOC100217144-1e-2At3g60910catalytic/ methyltransferaseO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.599.4GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
15.298.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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