Co-expression analysis

Gene ID Zm.15215.1.A1_at
Gene name Hypothetical protein LOC100193843
Homology with ArabidopsisSimilar to At5g22870: harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (HF=1e+0)
Module size 6 genes
NF 0.38
%ile 41.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.97Zm.15215.1.A1_atBM332652Hypothetical protein LOC100193843-1e+0At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.5065.70.98Zm.5012.1.A1_atCK849978auxin response factor 75-9e-1At3g45050unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.18992.1.A1_atCO521210--4e-1At5g20370serine-rich protein-relatedO.I.H.G.S.X.
0.3538.90.97Zm.18946.1.A1_atBM338625hypothetical protein LOC100278262-1e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3029.80.97Zm.9542.1.A1_atCF624708hypothetical protein LOC100192045-3e-16At4g16170unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.3775.1.A1_atAY103856.1chaperonin-3e-5At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.599.4GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
15.298.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620225_s_at, orthologous to the query gene, Zm.15215.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7189.51620225_s_atAt5g22870--1e+0At5g38720unknown proteinO.I.H.G.S.X.
0.9299.01606845_atAt5g22870hypothetical protein LOC100257315-1e+0At3g52510-O.I.H.G.S.X.
0.9299.01616735_atAt5g22870hypothetical protein LOC100257315-1e+0At5g50470NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)O.I.H.G.S.X.
0.8995.51612288_atAt5g22870--3e-1At4g09040RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.8995.51618561_atAt5g22870hypothetical protein LOC100246875-2e-5At3g03980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8995.51617334_s_atAt5g22870--1e-9At5g65660hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.8795.21606462_atAt5g22870hypothetical protein LOC100248701-1e+0At1g04970lipid-binding serum glycoprotein family proteinO.I.H.G.S.X.
0.8394.61621244_s_atAt5g22870hypothetical protein LOC100246875-2e-5At3g03980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8293.91622012_atAt5g22870--2e-2At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.8093.61606429_atAt5g22870hypothetical protein LOC100251832-2e-1At4g12390PME1 (PECTIN METHYLESTERASE INHIBITOR 1)O.I.H.G.S.X.
0.7491.01609555_atAt5g22870hypothetical protein LOC100261123-2e-30At5g08790ATAF2O.I.H.G.S.X.
0.7189.51618703_atAt5g22870hypothetical protein LOC100249546-6e-2At2g47350PAPA-1-like family protein / zinc finger (HIT type) family proteinO.I.H.G.S.X.
0.6183.21620319_s_atAt5g22870R2R3 Myb14 transcription factor-9e-2At4g11660AT-HSFB2BO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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