Co-expression analysis

Gene ID Zm.15215.1.A1_at
Gene name Hypothetical protein LOC100193843
Homology with ArabidopsisSimilar to At5g22870: harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (HF=1e+0)
Module size 6 genes
NF 0.38
%ile 41.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.97Zm.15215.1.A1_atBM332652Hypothetical protein LOC100193843-1e+0At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.5065.70.98Zm.5012.1.A1_atCK849978auxin response factor 75-9e-1At3g45050unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.18992.1.A1_atCO521210--4e-1At5g20370serine-rich protein-relatedO.I.H.G.S.X.
0.3538.90.97Zm.18946.1.A1_atBM338625hypothetical protein LOC100278262-1e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3029.80.97Zm.9542.1.A1_atCF624708hypothetical protein LOC100192045-3e-16At4g16170unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.3775.1.A1_atAY103856.1chaperonin-3e-5At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.599.4GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
15.298.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os05g0587300, orthologous to the query gene, Zm.15215.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7391.1Os05g0587300At5g22870-Protein prenyltransferase domain containingprotein4e-1At1g53300TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1)O.I.H.G.S.X.
0.2931.1Os01g0236000At5g22870-Hypothetical protein2e+0At5g20650COPT5O.I.H.G.S.X.
0.1813.7Os06g0589600At5g22870-Protein kinase domain containing protein7e-1At5g23600tRNA 2'phosphotransferase, putativeO.I.H.G.S.X.
0.063.0Os04g0619300At5g22870-Cyclin-like F-box domain containing protein3e-4At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.031.4Os08g0386700At5g22870-Beta 1,3-glycosyltransferase-like protein I2e-7At5g53340galactosyltransferase family proteinO.I.H.G.S.X.
0.031.4Os06g0687400At5g22870-Hypothetical plant protein family protein2e-30At3g26370unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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