| Gene ID | Zm.15206.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g57230: AGL16 (AGAMOUS-LIKE 16) (HF=6e-18) |
| Module size | 7 genes |
| NF | 0.21 |
| %ile | 16.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.53 | 69.1 | 0.90 | Zm.15206.1.A1_at | BM268642 | - | - | 6e-18 | At3g57230 | AGL16 (AGAMOUS-LIKE 16) | O.I. | H.G. | S.X. | |
| 0.28 | 28.1 | 0.91 | Zm.12338.1.S1_at | BQ744947 | hypothetical protein LOC100276807 | - | 5e+0 | At5g40451 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | 0.91 | Zm.2279.1.S1_at | BF728020 | - | - | 2e-2 | At3g54010 | PAS1 (PASTICCINO 1) | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | 0.93 | Zm.5017.1.S1_at | BM072931 | dynamin-related protein 1C | - | 5e-46 | At1g14830 | ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C) | O.I. | H.G. | S.X. | |
| 0.17 | 10.6 | 0.90 | Zm.10103.1.A1_at | AI947611 | hypothetical protein LOC100275728 | - | 4e+0 | At4g02370 | unknown protein | O.I. | H.G. | S.X. | |
| 0.14 | 7.7 | 0.92 | Zm.12612.1.A1_at | BU050513 | - | - | 6e-1 | At1g23260 | MMZ1 (MMS ZWEI HOMOLOGUE 1) | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.91 | Zm.4328.1.A1_at | AI711672 | hypothetical protein LOC100277618 | - | 1e+0 | At1g43580 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 19.9 | 99.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 19.3 | 99.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 15.2 | 98.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.3 | 98.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.1 | 98.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.7 | 98.7 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.2 | 98.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.7 | 93.2 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.93 | 98.7 | Contig16350_at | At3g57230 | - | - | 9e-3 | At3g57390 | AGL18 | O.I. | H.G. | S.X. | |
| 0.57 | 74.9 | Contig16351_at | At3g57230 | - | - | 5e-1 | At4g13480 | AtMYB79 (myb domain protein 79) | O.I. | H.G. | S.X. | |
| 0.09 | 7.4 | Contig8100_at | At3g57230 | - | - | 1e-24 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | H.G. | S.X. | |
| 0.08 | 6.5 | Contig2937_s_at | At3g57230 | - | - | 9e-27 | At3g25800 | PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2) | O.I. | H.G. | S.X. | |
| 0.08 | 6.5 | Contig1730_s_at | At3g57230 | - | - | 4e-19 | At3g01150 | PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.07 | 5.8 | Contig5296_at | At3g57230 | - | - | 4e-25 | At1g64550 | ATGCN3 | O.I. | H.G. | S.X. | |
| 0.05 | 4.1 | Contig15411_at | At3g57230 | - | - | 2e-4 | At5g49890 | CLC-C (CHLORIDE CHANNEL C) | O.I. | H.G. | S.X. | |
| 0.03 | 2.6 | Contig5115_at | At3g57230 | - | - | 3e-6 | At2g32600 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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