Co-expression analysis

Gene ID	Zm.15204.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g09650: HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152) (HF=8e-12)
Module size	6 genes
NF	0.06
%ile	2.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.91	Zm.15204.1.A1_at	BM268605	-	-	8e-12	At3g09650	HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.95	Zm.10239.1.S1_at	AF461813.1	chromatin complex subunit A101	-	5e-25	At5g66750	CHR1 (CHROMATIN REMODELING 1)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.95	Zm.15044.1.A1_at	CF631612	hypothetical protein LOC100193123	-	9e-18	At1g08450	CRT3 (CALRETICULIN 3)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.93	Zm.4904.1.S1_at	AI621949	arsenical pump-driving ATPase	-	3e-15	At3g10350	anion-transporting ATPase family protein	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.94	Zm.14452.1.S1_at	AY108380.1	ethylene response element binding protein	-	1e-8	At3g14230	RAP2.2	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.91	Zm.9057.1.A1_at	BM269084	hypothetical protein LOC100278711	-	3e-1	At3g21710	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.3	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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