Co-expression analysis

Gene ID Zm.15154.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g42380: bZIP transcription factor family protein (HF=2e-6)
Module size 21 genes
NF 0.48
%ile 61.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.97Zm.15154.1.A1_atBM080233--2e-6At2g42380bZIP transcription factor family proteinO.I.H.G.S.X.
0.7087.00.97Zm.4764.1.S1_atAI739879vacuolar protein sorting 37C-2e-3At2g36680-O.I.H.G.S.X.
0.5976.10.98Zm.4385.1.S1_atBQ487047small nuclear ribonucleoprotein-associated protein B-3e-15At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.
0.5875.10.97Zm.4755.1.A1_atAW091219--8e-9At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.5775.10.97Zm.3699.5.A1_atAY107222.1--3e-2At5g09995unknown proteinO.I.H.G.S.X.
0.5674.40.97Zm.14076.2.A1_a_atCO526265hypothetical protein LOC100279817-9e-2At5g27450MK (MEVALONATE KINASE)O.I.H.G.S.X.
0.5469.80.97Zm.16805.3.S1_atBM381902basic endochitinase C-2e-10At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.5369.10.98Zm.11605.1.A1_atBM379262--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.5166.40.97Zm.8466.1.S1_atBQ538688macrophage migration inhibitory factor-4e-11At5g01650macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.
0.5065.70.97Zm.14136.1.A1_atAY104147.1hypothetical protein LOC100193727-1e-21At1g27340F-box family proteinO.I.H.G.S.X.
0.4759.90.98Zm.8233.1.A1_atAI947630--1e-2At4g31580SRZ-22O.I.H.G.S.X.
0.4658.40.97Zm.540.1.A1_atAF244674.1glutathione transferase9-5e-1At2g01640unknown proteinO.I.H.G.S.X.
0.4149.70.97Zm.3633.2.S1_x_atCF634876APx1 - Cytosolic Ascorbate Peroxidase-3e-28At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.4149.70.98Zm.6454.1.A1_atAY106137.1PP1/PP2A phosphatases pleiotropic regulator PRL1-9e-29At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.4048.50.97Zm.12269.2.A1_a_atAW256119hypothetical protein LOC100193070-2e-4At3g14130(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.3945.60.98Zm.4132.1.A1_atCO529833hypothetical protein LOC100276765-4e-14At1g16520unknown proteinO.I.H.G.S.X.
0.3844.20.98Zm.5280.1.S1_atCK368650--2e-8At1g76760ATY1 (ARABIDOPSIS THIOREDOXIN Y1)O.I.H.G.S.X.
0.3641.30.97Zm.6964.1.S1_atAI665995--6e-2At4g22320unknown proteinO.I.H.G.S.X.
0.3538.90.97Zm.13763.1.A1_atCF624710hypothetical protein LOC100279845-2e-4At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.3538.90.98Zm.14687.1.S1_s_atCA828256hypothetical protein LOC100272479-3e-1At2g15770glycine-rich proteinO.I.H.G.S.X.
0.3336.00.97Zm.4883.1.A1_atAY107709.1Hypothetical protein LOC100216906-2e-5At1g07530SCL14 (SCARECROW-LIKE 14)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.897.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
6.797.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
3.795.4GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.595.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.595.1GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage