Co-expression analysis

Gene ID Zm.15089.1.S1_at
Gene name hypothetical protein LOC100275959
Homology with ArabidopsisSimilar to At5g55680: glycine-rich protein (HF=6e+0)
Module size 7 genes
NF 0.68
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.98Zm.15089.1.S1_atCN845421hypothetical protein LOC100275959-6e+0At5g55680glycine-rich proteinO.I.H.G.S.X.
0.8696.30.98Zm.7782.1.A1_atBM079881--3e-1At5g66250kinectin-relatedO.I.H.G.S.X.
0.8395.60.98Zm.7526.1.A1_atBM078809hypothetical protein LOC100194111-8e-2At3g02050KUP3 (K+ UPTAKE TRANSPORTER 3)O.I.H.G.S.X.
0.7590.80.98Zm.6731.1.A1_atAI395998hypothetical protein LOC100279494-1e-14At1g50670OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.5976.10.98Zm.10767.1.A1_atBQ539471short-chain dehydrogenase/reductase SDR-3e-1At2g14060S-adenosyl-L-methionine:carboxyl methyltransferase family proteinO.I.H.G.S.X.
0.5369.10.98Zm.17585.2.A1_atCO521576--2e+0At4g22010sks4 (SKU5 Similar 4)O.I.H.G.S.X.
0.4861.30.98Zm.10200.2.A1_atBM078569--1e+0At5g57990UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.798.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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