Co-expression analysis

Gene ID	Zm.14951.1.S1_at
Gene name	cell wall protein (put.); putative
Homology with Arabidopsis	Similar to At2g30370: allergen-related (HF=5e-3)
Module size	9 genes
NF	0.29
%ile	25.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	58.4	0.92	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.95	Zm.17816.2.S1_x_at	CK144883	tRNA pseudouridine synthase family protein	-	2e-2	At1g76120	tRNA pseudouridine synthase family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.94	Zm.1883.1.A1_at	AY107696.1	-	-	5e-25	At2g14170	ALDH6B2	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	Zm.11863.1.A1_at	AY104184.1	-	-	2e+0	At3g06780	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.95	Zm.8608.1.A1_at	BM334792	vascular plant one zinc finger protein	-	1e+0	At4g17730	SYP23 (SYNTAXIN OF PLANTS 23)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.95	Zm.2745.1.A1_at	AW067061	hypothetical protein LOC100277999	-	5e-1	At3g58150	-	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.9342.1.A1_at	BM340304	-	-	6e-1	At2g25890	glycine-rich protein / oleosin	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.95	Zm.9816.1.A1_at	BM332511	-	-	5e+0	At4g21970	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.94	Zm.18514.1.A1_at	CF628740	hypothetical protein LOC100192076	-	5e-3	At3g15200	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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