Co-expression analysis

Gene ID Zm.14944.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g27020: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.45
%ile 53.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.91Zm.14944.1.A1_atCB334702--1e+0At5g27020unknown proteinO.I.H.G.S.X.
0.7389.90.89Zm.14940.1.S1_atBM074436hypothetical protein LOC100192835-5e-22At2g2045060S ribosomal protein L14 (RPL14A)O.I.H.G.S.X.
0.5065.70.91Zm.18101.1.S1_atCA827356--5e+0At4g36020CSDP1 (cold shock domain protein 1)O.I.H.G.S.X.
0.3538.90.90Zm.1499.2.S1_a_atBE051646hypothetical protein LOC100274562 /// RING-H2 finger protein ATL1Q-7e+0At5g10695unknown proteinO.I.H.G.S.X.
0.2928.10.91Zm.1769.1.S1_atBF728598hypothetical protein LOC100276417-4e-1At5g63480unknown proteinO.I.H.G.S.X.
0.1912.80.88Zm.17778.1.S1_atCK370487--1e-3At1g77020DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621559_at, orthologous to the query gene, Zm.14944.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81621559_atAt5g27020hypothetical protein LOC100262734-3e-51At3g28860ABCB19O.I.H.G.S.X.
0.8394.61614094_atAt5g27020hypothetical protein LOC100255834-6e-43At4g08150KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)O.I.H.G.S.X.
0.8394.61614876_atAt5g27020hypothetical protein LOC100244642-1e+0At1g73510unknown proteinO.I.H.G.S.X.
0.6787.91613074_atAt5g27020similar to PDF-1e-1At2g42840PDF1 (PROTODERMAL FACTOR 1)O.I.H.G.S.X.
0.6787.91609418_s_atAt5g27020hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538-4e+0At5g35375unknown proteinO.I.H.G.S.X.
0.5779.81607851_atAt5g27020hypothetical protein LOC100266538-9e-2At1g04660glycine-rich proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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