Co-expression analysis

Gene ID Zm.14944.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g27020: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.45
%ile 53.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.91Zm.14944.1.A1_atCB334702--1e+0At5g27020unknown proteinO.I.H.G.S.X.
0.7389.90.89Zm.14940.1.S1_atBM074436hypothetical protein LOC100192835-5e-22At2g2045060S ribosomal protein L14 (RPL14A)O.I.H.G.S.X.
0.5065.70.91Zm.18101.1.S1_atCA827356--5e+0At4g36020CSDP1 (cold shock domain protein 1)O.I.H.G.S.X.
0.3538.90.90Zm.1499.2.S1_a_atBE051646hypothetical protein LOC100274562 /// RING-H2 finger protein ATL1Q-7e+0At5g10695unknown proteinO.I.H.G.S.X.
0.2928.10.91Zm.1769.1.S1_atBF728598hypothetical protein LOC100276417-4e-1At5g63480unknown proteinO.I.H.G.S.X.
0.1912.80.88Zm.17778.1.S1_atCK370487--1e-3At1g77020DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.49612.2.A1_at, orthologous to the query gene, Zm.14944.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7489.4TaAffx.49612.2.A1_atAt5g27020--5e-1At1g06980unknown proteinO.I.H.G.S.X.
0.7790.8TaAffx.4913.1.S1_atAt5g27020--2e+1At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.6483.6TaAffx.109025.3.S1_atAt5g27020--2e-1At1g08790unknown proteinO.I.H.G.S.X.
0.6383.1TaAffx.114767.1.S1_atAt5g27020--3e-3At4g17600LIL3:1O.I.H.G.S.X.
0.6282.3TaAffx.112158.1.S1_atAt5g27020--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.6182.0TaAffx.105769.1.S1_atAt5g27020--3e-1At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.6182.0TaAffx.58638.1.S1_atAt5g27020--4e+0At1g12805nucleotide bindingO.I.H.G.S.X.
0.5879.2TaAffx.30673.1.S1_atAt5g27020--7e-11At4g25630FIB2 (FIBRILLARIN 2)O.I.H.G.S.X.
0.5879.2TaAffx.24121.1.S1_atAt5g27020--2e-1At1g11590pectin methylesterase, putativeO.I.H.G.S.X.
0.5576.8TaAffx.29732.1.S1_atAt5g27020--7e-1At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.5374.9TaAffx.31791.1.S1_atAt5g27020--7e-1At5g26717-O.I.H.G.S.X.
0.5273.7TaAffx.58533.1.S1_atAt5g27020--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.5273.7TaAffx.35493.1.S1_atAt5g27020--4e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.
0.4969.7TaAffx.50210.1.S1_atAt5g27020--7e-2At1g60880AGL56O.I.H.G.S.X.
0.4869.0TaAffx.5596.1.S1_atAt5g27020--3e+0At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.4869.0TaAffx.78861.1.S1_atAt5g27020--1e+1At3g28070nodulin MtN21 family proteinO.I.H.G.S.X.
0.4666.8TaAffx.112158.1.S1_x_atAt5g27020--2e+1At3g28590unknown proteinO.I.H.G.S.X.
0.4666.8TaAffx.86790.1.S1_atAt5g27020--1e+1At5g18362unknown proteinO.I.H.G.S.X.
0.4464.5TaAffx.25008.1.S1_atAt5g27020--1e+1At5g24370invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4362.2TaAffx.55653.1.S1_atAt5g27020--1e+1At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4159.6TaAffx.8469.1.S1_atAt5g27020--1e+1At4g13140-O.I.H.G.S.X.
0.3956.1Ta.3501.3.A1_atAt5g27020--3e-1At5g08330TCP family transcription factor, putativeO.I.H.G.S.X.
0.3753.0TaAffx.3664.1.S1_atAt5g27020--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.3549.8Ta.1965.1.S1_atAt5g27020--6e-3At4g23330eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.3448.1TaAffx.114049.1.S1_atAt5g27020--5e+0At4g33560unknown proteinO.I.H.G.S.X.
0.3448.1TaAffx.132656.2.S1_atAt5g27020--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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