| Gene ID | Zm.14944.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g27020: unknown protein (HF=1e+0) |
| Module size | 6 genes |
| NF | 0.45 |
| %ile | 53.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 89.9 | 0.91 | Zm.14944.1.A1_at | CB334702 | - | - | 1e+0 | At5g27020 | unknown protein | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.89 | Zm.14940.1.S1_at | BM074436 | hypothetical protein LOC100192835 | - | 5e-22 | At2g20450 | 60S ribosomal protein L14 (RPL14A) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.91 | Zm.18101.1.S1_at | CA827356 | - | - | 5e+0 | At4g36020 | CSDP1 (cold shock domain protein 1) | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 0.90 | Zm.1499.2.S1_a_at | BE051646 | hypothetical protein LOC100274562 /// RING-H2 finger protein ATL1Q | - | 7e+0 | At5g10695 | unknown protein | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.91 | Zm.1769.1.S1_at | BF728598 | hypothetical protein LOC100276417 | - | 4e-1 | At5g63480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.19 | 12.8 | 0.88 | Zm.17778.1.S1_at | CK370487 | - | - | 1e-3 | At1g77020 | DNAJ heat shock N-terminal domain-containing protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 14.7 | 98.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.2 | 98.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.9 | 98.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.3 | 98.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.7 | 98.6 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.1 | 98.4 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.4 | 98.3 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.3 | 97.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.3 | 97.4 | GSM202298 | B73 immature ear tissue, biological replicate 2 | GSE8176 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.88 | 96.8 | Os04g0642000 | At5g27020 | - | ABC transporter-like protein | 3e-29 | At3g28860 | ABCB19 | O.I. | H.G. | S.X. | |
| 0.73 | 91.1 | Os06g0671800 | At5g27020 | - | Cellular retinaldehyde binding/alpha-tocopheroltransport family protein | 8e-1 | At5g34581 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.70 | 88.4 | Os02g0258200 | At5g27020 | - | HMG1/2 (high mobility group) box family protein | 9e-6 | At4g11080 | high mobility group (HMG1/2) family protein | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | Os10g0577400 | At5g27020 | - | Conserved hypothetical protein | 2e-1 | At1g22890 | unknown protein | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os04g0228100 | At5g27020 | - | Conserved hypothetical protein | 3e-6 | At4g02800 | unknown protein | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os02g0739700 | At5g27020 | - | Transcription factor E2F/dimerisation partner(TDP) family protein | 3e+0 | At4g19480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.58 | 77.0 | Os03g0288900 | At5g27020 | - | Hypothetical protein | 3e-1 | At1g05300 | ZIP5 | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os01g0931200 | At5g27020 | - | ARM repeat fold domain containing protein | 2e-1 | At5g55850 | NOI | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os01g0191800 | At5g27020 | - | Serine/threonine-protein kinase 12 (EC 2.7.1.37)(Aurora-B) (Fragment) | 1e-17 | At2g25880 | AtAUR2 (AtAurora2) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os07g0105700 | At5g27020 | - | Carboxy-terminal kinesin 2 (XCTK2) | 9e-8 | At4g05190 | ATK5 (ARABIDOPSIS THALIANA KINESIN 5) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os03g0736500 | At5g27020 | - | Syntaxin-related protein KNOLLE (Syntaxin 111)(AtSYP111) | 4e-5 | At3g11820 | SYP121 (SYNTAXIN OF PLANTS 121) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os12g0502300 | At5g27020 | - | Cyclin A2 | 4e-3 | At5g25380 | CYCA2 | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | Os06g0285400 | At5g27020 | - | Serine/threonine-specific kinase like protein | 8e-2 | At5g61660 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | Os08g0558400 | At5g27020 | - | Kinesin heavy chain (Fragment) | 1e-35 | At2g36200 | kinesin motor protein-related | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os01g0805600 | At5g27020 | - | Cyclin IaZm (Fragment) | 1e-6 | At2g26760 | CYCB1 | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os09g0560000 | At5g27020 | - | Arabidopsis thaliana protein of unknown functionDUF813 family protein | 3e-2 | At2g07170 | binding | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os03g0587200 | At5g27020 | - | Kinesin, motor region domain containing protein | 8e-6 | At3g20150 | kinesin motor family protein | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os12g0120000 | At5g27020 | - | Plant protein of unknown function DUF936 familyprotein | 1e+0 | At2g44560 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os05g0507000 | At5g27020 | - | - | 2e+0 | At2g11005 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os10g0572900 | At5g27020 | - | Protein of unknown function DUF296 domaincontaining protein | 7e-8 | At4g17950 | DNA-binding family protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os11g0580000 | At5g27020 | - | ARM repeat fold domain containing protein | 3e-1 | At1g54580 | ACP2 (ACYL CARRIER PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os03g0770900 | At5g27020 | - | Hypothetical protein | 1e+0 | At5g10310 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage