Co-expression analysis

Gene ID Zm.14944.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g27020: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.45
%ile 53.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.91Zm.14944.1.A1_atCB334702--1e+0At5g27020unknown proteinO.I.H.G.S.X.
0.7389.90.89Zm.14940.1.S1_atBM074436hypothetical protein LOC100192835-5e-22At2g2045060S ribosomal protein L14 (RPL14A)O.I.H.G.S.X.
0.5065.70.91Zm.18101.1.S1_atCA827356--5e+0At4g36020CSDP1 (cold shock domain protein 1)O.I.H.G.S.X.
0.3538.90.90Zm.1499.2.S1_a_atBE051646hypothetical protein LOC100274562 /// RING-H2 finger protein ATL1Q-7e+0At5g10695unknown proteinO.I.H.G.S.X.
0.2928.10.91Zm.1769.1.S1_atBF728598hypothetical protein LOC100276417-4e-1At5g63480unknown proteinO.I.H.G.S.X.
0.1912.80.88Zm.17778.1.S1_atCK370487--1e-3At1g77020DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os04g0642000, orthologous to the query gene, Zm.14944.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8896.8Os04g0642000At5g27020-ABC transporter-like protein3e-29At3g28860ABCB19O.I.H.G.S.X.
0.7391.1Os06g0671800At5g27020-Cellular retinaldehyde binding/alpha-tocopheroltransport family protein8e-1At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.7088.4Os02g0258200At5g27020-HMG1/2 (high mobility group) box family protein9e-6At4g11080high mobility group (HMG1/2) family proteinO.I.H.G.S.X.
0.6181.2Os10g0577400At5g27020-Conserved hypothetical protein2e-1At1g22890unknown proteinO.I.H.G.S.X.
0.6079.7Os04g0228100At5g27020-Conserved hypothetical protein3e-6At4g02800unknown proteinO.I.H.G.S.X.
0.6079.7Os02g0739700At5g27020-Transcription factor E2F/dimerisation partner(TDP) family protein3e+0At4g19480unknown proteinO.I.H.G.S.X.
0.5877.0Os03g0288900At5g27020-Hypothetical protein3e-1At1g05300ZIP5O.I.H.G.S.X.
0.5777.0Os01g0931200At5g27020-ARM repeat fold domain containing protein2e-1At5g55850NOIO.I.H.G.S.X.
0.5676.3Os01g0191800At5g27020-Serine/threonine-protein kinase 12 (EC 2.7.1.37)(Aurora-B) (Fragment)1e-17At2g25880AtAUR2 (AtAurora2)O.I.H.G.S.X.
0.5573.7Os07g0105700At5g27020-Carboxy-terminal kinesin 2 (XCTK2)9e-8At4g05190ATK5 (ARABIDOPSIS THALIANA KINESIN 5)O.I.H.G.S.X.
0.5573.7Os03g0736500At5g27020-Syntaxin-related protein KNOLLE (Syntaxin 111)(AtSYP111)4e-5At3g11820SYP121 (SYNTAXIN OF PLANTS 121)O.I.H.G.S.X.
0.5573.7Os12g0502300At5g27020-Cyclin A24e-3At5g25380CYCA2O.I.H.G.S.X.
0.5168.7Os06g0285400At5g27020-Serine/threonine-specific kinase like protein8e-2At5g61660glycine-rich proteinO.I.H.G.S.X.
0.5168.7Os08g0558400At5g27020-Kinesin heavy chain (Fragment)1e-35At2g36200kinesin motor protein-relatedO.I.H.G.S.X.
0.5068.0Os01g0805600At5g27020-Cyclin IaZm (Fragment)1e-6At2g26760CYCB1O.I.H.G.S.X.
0.4964.4Os09g0560000At5g27020-Arabidopsis thaliana protein of unknown functionDUF813 family protein3e-2At2g07170bindingO.I.H.G.S.X.
0.4964.4Os03g0587200At5g27020-Kinesin, motor region domain containing protein8e-6At3g20150kinesin motor family proteinO.I.H.G.S.X.
0.4964.4Os12g0120000At5g27020-Plant protein of unknown function DUF936 familyprotein1e+0At2g44560AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11)O.I.H.G.S.X.
0.4660.9Os05g0507000At5g27020--2e+0At2g11005glycine-rich proteinO.I.H.G.S.X.
0.4458.1Os10g0572900At5g27020-Protein of unknown function DUF296 domaincontaining protein7e-8At4g17950DNA-binding family proteinO.I.H.G.S.X.
0.4152.4Os11g0580000At5g27020-ARM repeat fold domain containing protein3e-1At1g54580ACP2 (ACYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.4152.4Os03g0770900At5g27020-Hypothetical protein1e+0At5g10310unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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