Co-expression analysis

Gene ID	Zm.14849.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g10550: XTH33 (HF=4e-4)
Module size	10 genes
NF	0.17
%ile	11.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	48.5	0.67	Zm.14849.1.A1_at	AW256200	-	-	4e-4	At1g10550	XTH33	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.88	Zm.15925.1.S1_at	AI395987	-	-	2e+0	At1g54215	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.88	Zm.7787.1.A1_at	BM349610	hypothetical protein LOC100277620	-	5e+0	At1g04000	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.88	Zm.5564.1.A1_at	AI734440	-	-	5e-1	At5g23950	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.90	Zm.1813.1.A1_a_at	CO529883	hypothetical protein LOC100272992	-	3e-1	At2g13570	NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.82	Zm.7495.1.A1_at	CF636496	hypothetical protein LOC100193062	-	5e-1	At2g13510	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.88	Zm.8135.1.A1_at	CF244603	-	-	4e-3	At3g59050	ATPAO3 (Polyamine oxidase 3)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.82	Zm.17219.2.A1_at	AY106749.1	Adenine phosphoribosyltransferase	-	1e-5	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.88	Zm.17997.1.A1_at	CK369019	phosphoethanolamine N-methyltransferase	-	2e-22	At3g18000	XPL1 (XIPOTL 1)	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.74	Zm.9594.1.A1_at	BM340702	SNARE-interacting protein KEULE	-	2e-29	At1g12360	KEU (keule)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	97.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.8	97.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1	96.8	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.8	96.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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