Co-expression analysis

Gene ID	Zm.14845.1.S1_at
Gene name	hypothetical protein LOC100277283
Homology with Arabidopsis	Similar to At4g34020: DJ-1 family protein (HF=2e+0)
Module size	10 genes
NF	0.33
%ile	32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	59.9	0.91	Zm.14845.1.S1_at	AY106843.1	hypothetical protein LOC100277283	-	2e+0	At4g34020	DJ-1 family protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.95	Zm.17633.1.A1_at	CK347448	tropinone reductase 2	-	7e+0	At2g15830	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.94	Zm.90.1.A1_a_at	AF004210.1	-	-	4e+0	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.96	Zm.1379.1.S1_at	AW927828	-	-	5e-4	At5g13990	ATEXO70C2 (exocyst subunit EXO70 family protein C2)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.95	Zm.5668.2.A1_at	BM078778	protein disulfide isomerase	-	4e-8	At2g47470	UNE5 (UNFERTILIZED EMBRYO SAC 5)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.95	Zm.9582.1.A1_at	BM340978	-	-	2e+0	At3g05550	hypoxia-responsive family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.94	Zm.3973.1.A1_at	AW288858	hypothetical protein LOC100192727	-	7e-17	At1g16040	-	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.95	Zm.9049.1.A1_x_at	BM074810	-	-	8e-3	At5g38940	manganese ion binding / nutrient reservoir	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.13032.1.A1_at	AY107007.1	-	-	2e+0	At1g68907	-	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.15800.5.A1_at	CA404204	-	-	1e-5	At4g13780	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.2	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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