Co-expression analysis

Gene ID Zm.14827.1.S1_at
Gene name m21 protein
Homology with ArabidopsisSimilar to At1g28200: FIP1 (FH INTERACTING PROTEIN 1) (HF=1e-1)
Module size 25 genes
NF 0.25
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.89Zm.14827.1.S1_atAJ430635.1m21 protein-1e-1At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.4048.50.95Zm.18394.1.A1_atCO534001ATP-dependent Clp protease ATP-binding subunit clpX-1e-27At5g53350CLPXO.I.H.G.S.X.
0.3641.30.93Zm.6001.1.A1_atCK144994hypothetical protein AY107629 /// hypothetical protein LOC100272871 /// ATP binding protein-2e-1At3g57280unknown proteinO.I.H.G.S.X.
0.3641.30.95Zm.19018.1.A1_atCO532922hypothetical protein LOC100193009-3e+0At4g38120bindingO.I.H.G.S.X.
0.3538.90.93Zm.8675.2.A1_a_atBQ293935nicotiana lesion-inducing like-3e-1At2g07728unknown proteinO.I.H.G.S.X.
0.3233.40.93Zm.13696.1.S1_atCF035266hypothetical protein LOC100192791-2e+0At4g37685unknown proteinO.I.H.G.S.X.
0.3233.40.94Zm.5504.1.A1_atAY105885.1hypothetical protein LOC100273181-5e+0At2g28370-O.I.H.G.S.X.
0.3233.40.91Zm.31.3.S1_a_atCD44671116-kDa zein protein-6e-1At5g15560unknown proteinO.I.H.G.S.X.
0.3233.40.96Zm.7082.2.S1_atCO523732hypothetical protein LOC100194344-1e-23At3g05590RPL18 (RIBOSOMAL PROTEIN L18)O.I.H.G.S.X.
0.3029.80.95Zm.6686.2.A1_atAY110308.1--6e+0At4g16580catalyticO.I.H.G.S.X.
0.2724.60.94Zm.7755.1.A1_atCN845074hypothetical protein LOC100275494-3e-18At1g16460ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2)O.I.H.G.S.X.
0.2318.60.96Zm.505.2.S1_a_atAI665681glucose translocator1-8e-1Atcg00800-O.I.H.G.S.X.
0.2216.90.94Zm.3567.2.S1_a_atAY061965.1fertilization independent endosperm2-3e-28At3g20740FIE (FERTILIZATION-INDEPENDENT ENDOSPERM)O.I.H.G.S.X.
0.2216.90.94Zm.14597.1.A1_atCO528299--4e-2At3g59710short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2014.20.96Zm.5401.1.S1_atAI065471pollen-specific protein C13-5e-1At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.1912.80.94Zm.3655.1.S1_atBU037691--1e-2At1g05300ZIP5O.I.H.G.S.X.
0.1912.80.94Zm.13747.1.S1_atAY106018.1--9e-1At5g61880signaling molecule-relatedO.I.H.G.S.X.
0.1710.60.92Zm.783.1.A1_atAY105282.1--1e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)O.I.H.G.S.X.
0.1710.60.94Zm.14383.1.A1_atAY109259.1--1e+0At2g33780VQ motif-containing proteinO.I.H.G.S.X.
0.169.40.96ZmAffx.761.1.S1_atAI746033--8e+0At5g50840-O.I.H.G.S.X.
0.158.60.93Zm.5785.2.S1_atAY106694.1--3e+0At5g50930DNA bindingO.I.H.G.S.X.
0.147.70.96Zm.16278.1.A1_atCO532740hypothetical protein LOC100193038-7e-1At1g31830amino acid permease family proteinO.I.H.G.S.X.
0.147.70.94Zm.13557.1.S1_atCD437328--2e-15At5g51230EMF2 (EMBRYONIC FLOWER 2)O.I.H.G.S.X.
0.147.70.94Zm.17041.1.S1_atCF919854--3e-1At2g40790ATCXXS2 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1)O.I.H.G.S.X.
0.104.60.95Zm.7095.1.A1_a_atCK371352hypothetical protein LOC100194044-7e-9At3g4503040S ribosomal protein S20 (RPS20A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.197.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.297.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM202315B73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
4.996.7GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
4.596.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
4.296.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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