Co-expression analysis

Gene ID Zm.14825.1.A1_at
Gene name m25 protein
Homology with ArabidopsisSimilar to At4g09960: STK (SEEDSTICK) (HF=5e-1)
Module size 8 genes
NF 0.41
%ile 47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.92Zm.14825.1.A1_atAJ430639.1m25 protein-5e-1At4g09960STK (SEEDSTICK)O.I.H.G.S.X.
0.6785.80.91Zm.17338.4.A1_atAI670678Hypothetical protein LOC100193489-3e+0At5g27820ribosomal protein L18 family proteinO.I.H.G.S.X.
0.5065.70.95Zm.789.1.S1_atAI964685protein phosphatase 2C-1e-6At3g51370protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4251.30.93Zm.5500.1.A1_atAI622280hypothetical protein LOC100272359-7e-2At1g79260unknown proteinO.I.H.G.S.X.
0.4048.50.93Zm.2197.1.S1_a_atAF007785.1cystathionine gamma-synthase1-6e-5At3g01120MTO1 (METHIONINE OVERACCUMULATION 1)O.I.H.G.S.X.
0.3641.30.95Zm.6166.2.A1_atCO529261hypothetical protein LOC100278925-6e-2At1g13870DRL1 (DEFORMED ROOTS AND LEAVES 1)O.I.H.G.S.X.
0.3131.60.95Zm.10799.1.S1_atAY108939.1hypothetical protein LOC100192060-3e+0At5g20110dynein light chain, putativeO.I.H.G.S.X.
0.1811.60.92Zm.17055.1.S1_atCF972499--2e-2At1g12665-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.297.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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