Co-expression analysis

Gene ID Zm.14802.1.S1_at
Gene name hypothetical protein LOC100277516
Homology with ArabidopsisSimilar to At3g13674: unknown protein (HF=6e+0)
Module size 7 genes
NF 0.54
%ile 70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.98Zm.14802.1.S1_atCK371044hypothetical protein LOC100277516-6e+0At3g13674unknown proteinO.I.H.G.S.X.
0.6179.50.98Zm.320.1.A1_atAJ297901.1basal layer antifungal peptide-5e+0At4g22820zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.5369.10.98Zm.9730.1.A1_atBM337086--5e+0At4g02830unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.6715.2.A1_atBM337592RING finger and CHY zinc finger domain-containing protein 1-3e-10At5g25560zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4455.70.98Zm.6597.1.A1_atAY106822.1hypothetical protein LOC100279221-8e-9At2g20050ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.4251.30.98Zm.5449.1.A1_atCF636377hypothetical protein LOC100273201-4e-1At5g5460050S ribosomal protein L24, chloroplast (CL24)O.I.H.G.S.X.
0.4048.50.98Zm.16824.2.S1_atBM340171--1e+0At3g07170sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.1GSM202314Mo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
8.398.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM202309Mo17 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.897.6GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.197.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM202316Mo17xB73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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