Co-expression analysis

Gene ID Zm.14798.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g01950: unknown protein (HF=1e-4)
Module size 27 genes
NF 0.35
%ile 36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.00.99Zm.14798.1.S1_x_atCF627333--1e-4At3g01950unknown proteinO.I.H.G.S.X.
0.4658.40.99ZmAffx.406.1.A1_atAI670258--4e-1At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.4556.40.99Zm.12308.1.S1_atCA827096--6e-4At5g53905unknown proteinO.I.H.G.S.X.
0.4251.30.99Zm.14014.1.A1_atCF050089NADH-ubiquinone oxidoreductase 23 kDa subunit-2e-62At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)O.I.H.G.S.X.
0.4149.70.99Zm.1436.1.S1_atCB617096beta-hexosaminidase beta chain-5e-2At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)O.I.H.G.S.X.
0.4149.70.99Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4O.I.H.G.S.X.
0.4048.50.99Zm.10554.1.A1_atCA398680--3e-10At2g44090-O.I.H.G.S.X.
0.4048.50.99Zm.4390.1.A1_atAI714448hypothetical protein LOC100191618-1e-8At3g06190BPM2 (BTB-POZ AND MATH DOMAIN 2)O.I.H.G.S.X.
0.4048.50.99ZmAffx.74.1.S1_atAI665196Hypothetical protein LOC100193550-5e-8At5g38720unknown proteinO.I.H.G.S.X.
0.3945.60.99Zm.6557.1.S1_atCF635193--4e-34At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)O.I.H.G.S.X.
0.3844.20.99Zm.6944.4.A1_a_atAW498023actin-1-4e-31At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.3641.30.99Zm.4193.1.S1_atBQ163283DANA2-7e+0At5g19810proline-rich extensin-like family proteinO.I.H.G.S.X.
0.3538.91.00Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.3437.20.99Zm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.H.G.S.X.
0.3233.40.99Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-O.I.H.G.S.X.
0.3131.60.99Zm.8902.1.A1_atCD441345glycosyltransferase-like-6e-11At1g18690transferase/ transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.3029.80.99Zm.5825.1.A1_atAI649790hypothetical protein LOC100279429-1e-2At1g10390nucleoporin family proteinO.I.H.G.S.X.
0.3029.80.99Zm.17494.1.A1_atCK145115hypothetical protein LOC100193709-3e-20At1g68010HPRO.I.H.G.S.X.
0.3029.80.99Zm.13054.1.A1_atCA403903hypothetical protein LOC100273794-9e-6At2g43080AT-P4H-1 (A. THALIANA P4H ISOFORM 1)O.I.H.G.S.X.
0.2828.10.99ZmAffx.485.1.A1_atAI691349--8e-1Atmg00140-O.I.H.G.S.X.
0.2828.11.00Zm.14841.1.A1_atAI491693hypothetical protein LOC100191514-2e+0At2g07681cytochrome c biogenesis protein, putativeO.I.H.G.S.X.
0.2724.60.99Zm.6092.1.S1_atCB885460DNA-binding protein S1FA2-4e-4At2g37120DNA-binding S1FA family proteinO.I.H.G.S.X.
0.2622.70.99Zm.6119.1.A1_atAY105312.1--4e-3At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2521.30.99Zm.13658.1.A1_atAY107148.1hypothetical protein LOC100193262-1e+0At3g50350unknown proteinO.I.H.G.S.X.
0.2521.30.99ZmAffx.108.1.S1_atAI665554Hypothetical protein LOC100191707-8e-1At5g39640unknown proteinO.I.H.G.S.X.
0.2521.31.00Zm.34.2.S1_atAY103769.1--1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.2419.80.99ZmAffx.1103.1.A1_atAW191100--1e+1At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.198.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
11.498.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
7.897.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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