Co-expression analysis

Gene ID	Zm.14784.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g01175: - (HF=3e+0)
Module size	8 genes
NF	0.35
%ile	35.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.3	0.96	Zm.14784.1.S1_at	AI795527	-	-	3e+0	At3g01175	-	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	ZmAffx.1198.1.S1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.95	Zm.3566.1.A1_at	BG873859	-	-	1e+0	At3g23140	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.18556.1.S1_at	CO049296	versicolorin reductase	-	3e+0	At1g11230	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	ZmAffx.96.1.A1_at	AI665410	hydroquinone glucosyltransferase	-	1e+1	At4g39130	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.18085.1.S1_at	CK986038	hypothetical protein LOC100274126	-	5e-11	At5g13800	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.469.1.A1_at	AF178952.1	voltage-dependent anion channel protein 2	-	2e-4	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.97	Zm.16024.1.S1_a_at	AF298769.1	40S ribosomal protein S24	-	1e-26	At3g04920	40S ribosomal protein S24 (RPS24A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.8	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.6	99.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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