Co-expression analysis

Gene ID Zm.14692.1.A1_s_at
Gene name hypothetical protein LOC100276042
Homology with ArabidopsisSimilar to At1g09195: - (HF=5e+0)
Module size 6 genes
NF 0.68
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.91.00Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-O.I.H.G.S.X.
0.6785.81.00ZmAffx.87.1.A1_atAI665344--1e+1At5g39330unknown proteinO.I.H.G.S.X.
0.6179.51.00Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.6077.81.00Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4O.I.H.G.S.X.
0.5065.71.00Zm.7016.1.A1_a_atAY103859.1hypothetical protein LOC100275203 /// hypothetical protein LOC100276238-3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.5065.71.00Zm.34.2.S1_atAY103769.1--1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6077.80.99Zm.16798.2.A1_a_atCF633780dynamin-related protein 1A-3e-14At5g42080ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)O.I.H.G.S.X.
0.5369.10.99ZmAffx.406.1.A1_atAI670258--4e-1At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.5369.10.99Zm.8824.1.A1_atBM347277FK506-binding protein 4-2e-6At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.5065.70.99Zm.368.1.A1_a_atAF020813.1glucose-6-phosphate/phosphate-translocator precursor /// hypothetical protein LOC100193334-4e-37At1g61800GPT2O.I.H.G.S.X.
0.5065.70.99Zm.6549.1.A1_atBM075679--9e+0At5g04910unknown proteinO.I.H.G.S.X.
0.5065.70.99Zm.10258.1.S1_atBM501769S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ thiopurine S-methyltransferase-2e-7At2g43920thiol methyltransferase, putativeO.I.H.G.S.X.
0.5065.71.00Zm.14688.1.S1_atBQ485280--2e-2At5g42980ATTRX3 (THIOREDOXIN 3)O.I.H.G.S.X.
0.4759.90.99Zm.9905.1.A1_atAY107944.1IDP680 protein /// hypothetical protein LOC100275890 /// RAB5-interacting protein-8e+0At5g66490unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.18087.1.A1_atCK985875--5e-18At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.4455.70.99Zm.2800.1.A1_atBG842849hypothetical protein LOC100193119-6e-11At3g09100mRNA capping enzyme family proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.74.1.S1_atAI665196Hypothetical protein LOC100193550-5e-8At5g38720unknown proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.12.1.S1_atAY562491.1kaurene synthase2-1e-7At4g02780GA1 (GA REQUIRING 1)O.I.H.G.S.X.
0.4455.70.99Zm.12308.1.S1_atCA827096--6e-4At5g53905unknown proteinO.I.H.G.S.X.
0.4455.71.00Zm.14471.1.A1_a_atCF01721060S ribosomal protein L7-1-8e-31At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.
0.4352.80.99Zm.10554.1.A1_atCA398680--3e-10At2g44090-O.I.H.G.S.X.
0.4352.80.99ZmAffx.1142.1.A1_atAW399873--2e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.4251.30.99Zm.17248.3.A1_x_atAW057073hypothetical protein LOC100280404-7e-11At5g37510EMB1467 (embryo defective 1467)O.I.H.G.S.X.
0.4048.50.99ZmAffx.766.1.A1_atAI746089hypothetical protein LOC100191384-3e+0At3g12320unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.8812.1.A1_a_atBM348823hypothetical protein LOC100273324 /// hypothetical protein LOC100274414-2e-7At1g16560Per1-like family proteinO.I.H.G.S.X.
0.4048.50.99Zm.4471.2.S1_a_atCA401385pyruvate, orthophosphate dikinase1-5e-25At4g15530PPDK (pyruvate orthophosphate dikinase)O.I.H.G.S.X.
0.4048.51.00ZmAffx.1103.1.A1_atAW191100--1e+1At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.
0.4048.51.00Zm.4390.1.A1_atAI714448hypothetical protein LOC100191618-1e-8At3g06190BPM2 (BTB-POZ AND MATH DOMAIN 2)O.I.H.G.S.X.
0.3844.20.99Zm.5278.1.A1_atAI619074tac7077-2e-7At4g33140unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.9014.1.S1_atCK347434--7e-100At2g42500PP2A-4O.I.H.G.S.X.
0.3641.30.99Zm.17937.1.A1_atCO529646hypothetical protein LOC100272364-6e+0At5g48175unknown proteinO.I.H.G.S.X.
0.3641.30.99Zm.629.1.S1_atAF127021.1RNA polymerase T phage-like 1-9e-15At1g68990DNA-directed RNA polymerase, mitochondrial (RPOMT)O.I.H.G.S.X.
0.3538.90.99Zm.15442.1.A1_atBM379425Light-harvesting chlorophyll a/b binding protein-9e-37At2g34420LHB1B2O.I.H.G.S.X.
0.3538.90.99Zm.13322.1.A1_atBM895136--1e+0At1g52855unknown proteinO.I.H.G.S.X.
0.3538.90.99ZmAffx.564.1.A1_atAI714609--8e-1At3g27340unknown proteinO.I.H.G.S.X.
0.3437.20.99Zm.6944.4.A1_a_atAW498023actin-1-4e-31At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.3336.00.99Zm.8884.1.A1_atCF018008hypothetical protein LOC100280133-3e-9At3g48890ATMP2O.I.H.G.S.X.
0.3336.00.99Zm.50.2.A1_atAY105267.1hypothetical protein LOC100280155-4e+0At3g48740nodulin MtN3 family proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.984.1.A1_s_atAI834096Superoxide dismutase9-3e+0At3g43840oxidoreductase, acting on the CH-CH group of donorsO.I.H.G.S.X.
0.3336.00.99ZmAffx.60.1.S1_atAI665094--8e-1At2g41650unknown proteinO.I.H.G.S.X.
0.3336.00.99Zm.18808.1.A1_atCO526738--1e+0At1g02840SR1O.I.H.G.S.X.
0.3336.00.99Zm.13465.1.A1_atAY109099.1hypothetical protein LOC100274229-3e+0At5g25460unknown proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.840.1.A1_atAI770592--2e-1At1g36940unknown proteinO.I.H.G.S.X.
0.3233.40.99ZmAffx.727.1.S1_atAI739989--8e-1At3g26990-O.I.H.G.S.X.
0.3233.40.99Zm.7168.1.S1_atAY103791.1hypothetical protein LOC100273659-4e-6At3g24170ATGR1 (glutathione-disulfide reductase)O.I.H.G.S.X.
0.3233.40.99ZmAffx.219.1.A1_atAI670227--3e+0At3g30430F-box family proteinO.I.H.G.S.X.
0.3233.40.99Zm.2999.1.A1_atCF632191hypothetical protein LOC100193783-2e-9At5g18110NCBP (NOVEL CAP-BINDING PROTEIN)O.I.H.G.S.X.
0.3233.40.99Zm.348.2.A1_a_atCK347453acidic ribosomal protein P3-9e-2At1g64620Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.3131.60.99Zm.9389.1.A1_a_atCO524440catalytic/ protein phosphatase type 2C-6e+0At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.3131.60.99Zm.13402.1.S1_atAF457950.1aspartate carbamoyltransferase 1-4e-7At3g20330aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB)O.I.H.G.S.X.
0.3131.60.99Zm.14270.1.A1_a_atAY105925.1hypothetical protein LOC100216603-2e+0At3g56510TBP-binding protein, putativeO.I.H.G.S.X.
0.3131.60.99ZmAffx.903.1.A1_atAI770912--1e+1At3g42310unknown proteinO.I.H.G.S.X.
0.3131.61.00Zm.14841.1.A1_atAI491693hypothetical protein LOC100191514-2e+0At2g07681cytochrome c biogenesis protein, putativeO.I.H.G.S.X.
0.3029.80.99Zm.16638.1.A1_atCF647771hypothetical protein LOC100275580-3e+0At4g13490zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3029.80.99Zm.7826.1.S1_atCO532898HVA22-like protein a-1e-1At4g38160pde191 (pigment defective 191)O.I.H.G.S.X.
0.3029.80.99ZmAffx.1299.1.S1_at40794996-27--0Atmg00580-O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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