Co-expression analysis

Gene ID Zm.14692.1.A1_s_at
Gene name hypothetical protein LOC100276042
Homology with ArabidopsisSimilar to At1g09195: - (HF=5e+0)
Module size 6 genes
NF 0.68
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.91.00Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-O.I.H.G.S.X.
0.6785.81.00ZmAffx.87.1.A1_atAI665344--1e+1At5g39330unknown proteinO.I.H.G.S.X.
0.6179.51.00Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.6077.81.00Zm.7727.1.S1_s_atCK986121polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-5e-129At5g20620UBQ4O.I.H.G.S.X.
0.5065.71.00Zm.7016.1.A1_a_atAY103859.1hypothetical protein LOC100275203 /// hypothetical protein LOC100276238-3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.5065.71.00Zm.34.2.S1_atAY103769.1--1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.66322.1.S1_at, orthologous to the query gene, Zm.14692.1.A1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6684.0GmaAffx.66322.1.S1_atAt1g09195--7e-7At4g02500XT2 (UDP-XYLOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.5071.7GmaAffx.29081.1.S1_atAt1g09195--3e-3At3g23980unknown proteinO.I.H.G.S.X.
0.4968.3GmaAffx.34498.1.S1_atAt1g09195--6e-1At3g14410transporter-relatedO.I.H.G.S.X.
0.4463.3Gma.11119.3.S1_atAt1g09195--2e-83At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.4259.3GmaAffx.90159.1.S1_atAt1g09195--5e+0At4g22650-O.I.H.G.S.X.
0.3853.3GmaAffx.88733.1.A1_s_atAt1g09195--2e+0At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3548.6GmaAffx.66595.1.A1_atAt1g09195--6e-6At1g27500kinesin light chain-relatedO.I.H.G.S.X.
0.3447.2Gma.10800.2.S1_atAt1g09195--3e-20At1g15270-O.I.H.G.S.X.
0.3142.2GmaAffx.20083.1.A1_atAt1g09195--3e-4At2g24860chaperone protein dnaJ-relatedO.I.H.G.S.X.
0.3040.4Gma.7510.1.A1_atAt1g09195--7e-28At1g79610sodium proton exchanger, putative (NHX6)O.I.H.G.S.X.
0.3040.4GmaAffx.9084.1.S1_atAt1g09195--4e-1At5g46250RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2839.0Gma.2034.1.S1_atAt1g09195--2e-13At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.
0.2633.9GmaAffx.91367.1.S1_s_atAt1g09195--5e-90At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.2633.9Gma.4499.1.A1_atAt1g09195--2e-2At5g51170unknown proteinO.I.H.G.S.X.
0.2633.9Gma.11105.1.A1_atAt1g09195--1e+0At1g63105unknown proteinO.I.H.G.S.X.
0.2532.6Gma.14137.1.A1_atAt1g09195--7e-1At4g20350unknown proteinO.I.H.G.S.X.
0.2532.6Gma.3848.1.S1_atAt1g09195--4e-48At1g36050unknown proteinO.I.H.G.S.X.
0.2430.9GmaAffx.89368.1.A1_s_atAt1g09195--4e-19At1g15270-O.I.H.G.S.X.
0.2329.9GmaAffx.4951.1.S1_s_atAt1g09195--2e-5At4g14410basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2126.6Gma.2910.1.S1_atAt1g09195--2e+0At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)O.I.H.G.S.X.
0.1923.7Gma.11119.4.S1_x_atAt1g09195--1e-94At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.1923.7Gma.15666.1.A1_atAt1g09195--1e-22At4g32140-O.I.H.G.S.X.
0.1822.3GmaAffx.8527.1.S1_atAt1g09195--3e-22At2g14255zinc ion bindingO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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