Co-expression analysis

Gene ID Zm.14591.3.S1_a_at
Gene name triosephosphate isomerase, cytosolic
Homology with ArabidopsisSimilar to At3g55440: TPI (TRIOSEPHOSPHATE ISOMERASE) (HF=3e-7)
Module size 24 genes
NF 0.32
%ile 30.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.95Zm.14591.3.S1_a_atCK370424triosephosphate isomerase, cytosolic-3e-7At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.4658.40.96Zm.12549.1.A1_atAI649492mitochondrial aspartate-glutamate transporter AGC1-6e+0At4g14276-O.I.H.G.S.X.
0.4455.70.95ZmAffx.682.1.A1_atAI734793--3e+0At1g27000bZIP family transcription factorO.I.H.G.S.X.
0.4048.50.97ZmAffx.1088.1.A1_atAW037041--2e-1At3g30845unknown proteinO.I.H.G.S.X.
0.3945.60.96ZmAffx.1033.1.A1_atAI881710--8e-1At1g12064unknown proteinO.I.H.G.S.X.
0.2419.80.98--O.I.H.G.S.X.
0.3538.90.97Zm.13564.1.S1_atAY108022.1--4e-1At3g53010-O.I.H.G.S.X.
0.3538.90.97Zm.19269.1.A1_atCO521789hypothetical protein LOC100275524-3e-1At1g53120RNA-binding S4 domain-containing proteinO.I.H.G.S.X.
0.3437.20.95ZmAffx.1069.1.S1_atAI941949--6e+0At5g12380annexin, putativeO.I.H.G.S.X.
0.3336.00.96Zm.8772.1.A1_atCF018678hypothetical protein LOC100192757-2e-38At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)O.I.H.G.S.X.
0.3336.00.98ZmAffx.1192.1.S1_atBE025301hypothetical protein LOC100278640-6e+0At3g53650histone H2B, putativeO.I.H.G.S.X.
0.3233.40.97Zm.6497.1.A1_atAI692097serine/threonine-protein kinase AtPK19-5e+0At3g08730PK1 (PROTEIN-SERINE KINASE 1)O.I.H.G.S.X.
0.3233.40.96Zm.2205.1.A1_atAW324711hypothetical protein LOC100193198-1e+0At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.3233.40.97Zm.3851.3.A1_a_atCA399586--5e+0At1g20340DRT112O.I.H.G.S.X.
0.3131.60.95Zm.4250.1.A1_atT18710autophagy-related 3-8e-13At5g61500ATG3O.I.H.G.S.X.
0.3029.80.96RPTR-Zm-S69414-1_s_atRPTR-Zm-S69414-1---O.I.H.G.S.X.
0.2928.10.98ZmAffx.593.1.S1_atAI715021--2e-1At3g28630-O.I.H.G.S.X.
0.2828.10.96ZmAffx.1061.1.A1_atAI881945Hypothetical protein LOC100193941-2e-1At4g22160unknown proteinO.I.H.G.S.X.
0.2419.80.98--O.I.H.G.S.X.
0.2115.50.97ZmAffx.1091.1.A1_atAW066092--3e+0At5g44300dormancy/auxin associated family proteinO.I.H.G.S.X.
0.2014.20.97Zm.16279.1.S1_atCF058129actin associated protein-5e-1At4g25150acid phosphatase, putativeO.I.H.G.S.X.
0.169.40.97Zm.2337.1.A1_atAW355868--4e+0At5g06660unknown proteinO.I.H.G.S.X.
0.169.40.98Zm.8868.1.A1_atBM335939hypothetical protein LOC100275200-2e+0At3g05000transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.158.60.98Zm.15678.2.A1_atCF632171--5e+0At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.299.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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