Co-expression analysis

Gene ID	Zm.1452.1.A1_at
Gene name	hypothetical protein LOC100191570
Homology with Arabidopsis	Similar to At3g50760: GATL2 (Galacturonosyltransferase-like 2) (HF=9e-3)
Module size	17 genes
NF	0.83
%ile	98.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.92	Zm.1452.1.A1_at	CA403441	hypothetical protein LOC100191570	-	9e-3	At3g50760	GATL2 (Galacturonosyltransferase-like 2)	O.I.	H.G.	S.X.	Please select
0.94	99.5	0.97	Zm.16313.2.S1_x_at	BM073358	hypothetical protein LOC100272662	-	4e+0	At5g23320	ATSTE14A (ARABIDOPSIS HOMOLOG OF YEAST STE14 A)	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.96	Zm.3668.1.A1_at	AI649862	-	-	1e-10	At1g54450	calcium-binding EF-hand family protein	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.97	Zm.16339.1.S1_at	AY107020.1	calmodulin-binding protein MPCBP	-	5e-8	At2g43040	NPG1 (no pollen germination 1)	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.97	Zm.16340.1.A1_at	CA402857	DNA binding protein	-	1e-2	At2g45430	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.96	Zm.1458.1.S1_at	BM418233	hypothetical protein LOC100275716	-	1e+0	At5g59610	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.95	Zm.15977.1.S1_at	AY108613.1	hypothetical protein LOC100274845 /// hypothetical protein LOC100278086	-	5e+0	At5g19050	unknown protein	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.96	Zm.6762.1.A1_at	AI396242	hypothetical protein LOC100279105	-	2e+0	At5g38650	proteasome maturation factor UMP1 family protein	O.I.	H.G.	S.X.	Please select
0.85	95.9	0.96	Zm.14572.1.A1_at	CB179459	-	-	4e+0	At1g23570	unknown protein	O.I.	H.G.	S.X.	Please select
0.84	95.8	0.97	Zm.14573.1.S1_at	CO527252	glucan endo-1,3-beta-glucosidase 7	-	9e-1	At3g46570	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.97	Zm.12138.1.S1_at	CO517967	regulator of ribonuclease activity A	-	1e-4	At5g16450	dimethylmenaquinone methyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.79	92.8	0.97	Zm.14574.1.A1_at	CO530137	-	-	1e+0	At4g11700	unknown protein	O.I.	H.G.	S.X.	Please select
0.79	92.8	0.97	Zm.676.1.S1_a_at	AF288075.1	diphosphonucleotide phosphatase1	-	8e-4	At5g63980	SAL1	O.I.	H.G.	S.X.	Please select
0.78	92.5	0.96	Zm.6757.1.S1_at	CF636648	GAST1 protein	-	2e-3	At5g15230	GASA4 (GAST1 PROTEIN HOMOLOG 4)	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.95	Zm.14519.1.A1_at	AI691490	cell wall integrity protein scw1	-	8e-7	At3g21215	RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.76	91.1	0.96	Zm.14518.1.S1_at	CD434065	pyruvate decarboxylase	-	6e-28	At5g54960	PDC2 (pyruvate decarboxylase-2)	O.I.	H.G.	S.X.	Please select
0.65	82.1	0.96	Zm.13489.1.S1_at	AY108817.1	hypothetical protein LOC100275030	-	4e+0	At2g43930	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320462	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM375788	Deep-sowing 10d treatment Control, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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