Co-expression analysis

Gene ID Zm.1450.1.S1_at
Gene name hypothetical protein LOC100275439
Homology with ArabidopsisSimilar to At5g17210: unknown protein (HF=2e+1)
Module size 19 genes
NF 0.36
%ile 38.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.00.95Zm.1450.1.S1_atBM337200hypothetical protein LOC100275439-2e+1At5g17210unknown proteinO.I.H.G.S.X.
0.5166.40.96Zm.16804.1.S1_atCK37059550S ribosomal protein L17-2e-6At5g09770ribosomal protein L17 family proteinO.I.H.G.S.X.
0.4658.40.96Zm.18111.1.S1_atCF632606peroxidase 17-8e-4At2g22420peroxidase 17 (PER17) (P17)O.I.H.G.S.X.
0.4455.70.96Zm.17323.1.S1_atCK370311protein binding protein-3e-1At1g76820GTP binding / GTPaseO.I.H.G.S.X.
0.4251.30.96Zm.150.1.A1_atAY103868.1triose phosphate/phosphate translocator-1e-21At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)O.I.H.G.S.X.
0.4251.30.96Zm.4870.1.A1_a_atCK985786dehydrin-7e-4At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.4149.70.96Zm.10790.1.S1_atAY106615.1glutamyl-tRNA reductase1 /// hypothetical protein LOC100191548-4e-6At1g58290HEMA1O.I.H.G.S.X.
0.3844.20.96ZmAffx.1298.1.S1_at40794996-139--0Atmg00730-O.I.H.G.S.X.
0.3538.90.97Zm.5104.1.A1_atAI615082--4e-6At3g05940unknown proteinO.I.H.G.S.X.
0.3336.00.96Zm.1364.1.A1_atAW927470structural constituent of ribosome-6e-3At5g27820ribosomal protein L18 family proteinO.I.H.G.S.X.
0.3131.60.97Zm.6944.2.S1_a_atCF008486--2e-158At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.3131.60.97Zm.2498.1.S1_atAF322918.1RPD3 histone deacetylase homolog-1e-6At5g61060HDA05 (HISTONE DEACETYLASE 5)O.I.H.G.S.X.
0.2828.10.96Zm.13076.1.A1_atBQ703993--2e+0At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.H.G.S.X.
0.2622.70.96Zm.245.1.S1_atAY108063.1glutathione transferase6-2e-1At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.2521.30.96Zm.2031.4.A1_atBM341698metallothionein-like protein type 2-1e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.2521.30.97Zm.15177.1.A1_atBM339919--5e+0At5g45010ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)O.I.H.G.S.X.
0.2419.80.97Zm.14995.1.A1_atBQ538186--2e+0At1g62960ACS10 (ACC SYNTHASE 10)O.I.H.G.S.X.
0.2014.20.96Zm.7008.1.A1_atAY106262.1xyloglucan endotransglycosylase/hydrolase protein 8-7e-1At1g18210calcium-binding protein, putativeO.I.H.G.S.X.
0.158.60.97Zm.2330.1.S1_atBE552610--4e-15At2g42120POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.198.6GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.592.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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