Co-expression analysis

Gene ID Zm.14497.4.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g07790: HTB1 (HF=4e-13)
Module size 9 genes
NF 0.82
%ile 98.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.94Zm.14497.4.A1_atCF631109--4e-13At1g07790HTB1O.I.H.G.S.X.
0.8996.80.95Zm.2385.2.A1_atAY111554.1hypothetical protein LOC100276100-1e-15At2g34510-O.I.H.G.S.X.
0.8495.80.95Zm.6420.1.A1_atBM073145hypothetical protein LOC100279192-1e-12At1g43850SEU (seuss)O.I.H.G.S.X.
0.8495.80.95Zm.5809.1.A1_atAI649739ATATH13-4e-40At5g64940ATATH13O.I.H.G.S.X.
0.8294.60.94Zm.4468.1.A1_atAW288919--2e-17At4g39980DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)O.I.H.G.S.X.
0.8094.00.94Zm.13287.1.S1_atCA826822--4e+0At2g26010PDF1.3 (plant defensin 1.3)O.I.H.G.S.X.
0.7892.50.95Zm.11255.1.A1_atAY107659.1Hypothetical protein LOC100217136-3e-32At5g40200DegP9 (DegP protease 9)O.I.H.G.S.X.
0.7389.90.94Zm.12517.1.A1_atCF624446Hypothetical protein LOC100191598-2e+0At4g16024unknown proteinO.I.H.G.S.X.
0.7389.90.94Zm.14272.3.A1_atBG835930Corn cystatin I-1e-7At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.497.8GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
6.197.4GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.697.1GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.094.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.291.3GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
2.291.3GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.291.3GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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