Co-expression analysis

Gene ID	Zm.14474.1.S1_a_at
Gene name	hypothetical protein LOC100273044
Homology with Arabidopsis	Similar to At2g34560: katanin, putative (HF=1e-33)
Module size	6 genes
NF	0.35
%ile	36.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.96	Zm.14474.1.S1_a_at	CD001875	hypothetical protein LOC100273044	-	1e-33	At2g34560	katanin, putative	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.96	Zm.15213.1.A1_at	BM331832	-	-	3e+0	At5g67070	RALFL34 (ralf-like 34)	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.96	Zm.12547.1.A1_at	AI622168	RNA binding protein	-	1e-3	At4g03110	RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.97	Zm.12385.1.S1_at	BQ578257	hypothetical protein LOC100274490	-	1e+0	At1g61660	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.96	Zm.8587.1.A1_at	BE997225	-	-	4e-1	At1g68845	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.97	Zm.3251.1.A1_at	CK145401	hypothetical protein LOC100280262	-	2e-3	At3g13180	NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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