Co-expression analysis

Gene ID	Zm.14471.1.A1_a_at
Gene name	60S ribosomal protein L7-1
Homology with Arabidopsis	Similar to At2g44120: 60S ribosomal protein L7 (RPL7C) (HF=8e-31)
Module size	6 genes
NF	0.42
%ile	48.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	1.00	Zm.14471.1.A1_a_at	CF017210	60S ribosomal protein L7-1	-	8e-31	At2g44120	60S ribosomal protein L7 (RPL7C)	O.I.	H.G.	S.X.	Please select
0.46	58.4	1.00	Zm.6188.2.S1_at	AY108898.1	hypothetical protein LOC100194248	-	4e-2	At1g31140	agl63 (AGAMOUS-LIKE 63)	O.I.	H.G.	S.X.	Please select
0.40	48.5	1.00	Zm.4166.1.A1_at	BG841131	hypothetical protein LOC100191831	-	1e+0	At1g17145	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.31	31.6	1.00	Zm.14692.1.A1_s_at	BQ539260	hypothetical protein LOC100276042	-	5e+0	At1g09195	-	O.I.	H.G.	S.X.	Please select
0.31	31.6	1.00	Zm.14841.1.A1_at	AI491693	hypothetical protein LOC100191514	-	2e+0	At2g07681	cytochrome c biogenesis protein, putative	O.I.	H.G.	S.X.	Please select
0.30	29.8	1.00	ZmAffx.87.1.A1_at	AI665344	-	-	1e+1	At5g39330	unknown protein	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.7	93.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
1.8	88.9	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
1.8	88.9	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
1.7	88.2	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
1.7	88.2	GSM205367	Mo17xB73 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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