Co-expression analysis

Gene ID	Zm.1423.1.A1_at
Gene name	RING zinc finger protein-like
Homology with Arabidopsis	Similar to At1g69330: zinc finger (C3HC4-type RING finger) family protein (HF=2e-7)
Module size	6 genes
NF	0.75
%ile	95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.1423.1.A1_at	CF047935	RING zinc finger protein-like	-	2e-7	At1g69330	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.15843.1.S1_at	CD988927	hypothetical protein LOC100275209	-	9e-1	At2g39770	CYT1 (CYTOKINESIS DEFECTIVE 1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.526.1.S1_at	AF242320.1	hypothetical LOC541826	-	1e-3	At5g14620	DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.3044.1.S1_at	AW360661	-	-	2e-10	At1g27900	RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	Zm.3044.2.S1_a_at	AI881563	-	-	8e-1	At1g59835	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.99	Zm.3044.2.A1_at	AI881563	-	-	8e-1	At1g59835	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
8.7	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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