Co-expression analysis

Gene ID	Zm.14138.2.A1_at
Gene name	hypothetical protein LOC100275347
Homology with Arabidopsis	Similar to At1g56423: unknown protein (HF=3e-9)
Module size	6 genes
NF	0.67
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.97	Zm.14138.2.A1_at	CD219182	hypothetical protein LOC100275347	-	3e-9	At1g56423	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.4845.1.S1_x_at	CD442886	alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE	-	4e-5	At4g03330	SYP123 (SYNTAXIN OF PLANTS 123)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.4846.1.A1_at	BQ538226	cyclin B2	-	3e-7	At1g76310	CYCB2	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.3780.1.S1_at	AW438304	low-molecular-weight cysteine-rich protein LCR69	-	9e-2	At1g47317	-	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.98	Zm.9411.1.S1_at	CA827391	SNF1-related protein kinase regulatory subunit beta-2	-	4e-1	At4g26150	CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.14456.2.S1_a_at	CA399302	allyl alcohol dehydrogenase-like protein	-	2e-5	At2g36620	RPL24A (ribosomal protein L24)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	98.4	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
5.5	97.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM253254	ZM_24h_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.8	95.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM253255	ZM_24h_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.3	94.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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