Co-expression analysis

Gene ID	Zm.14107.1.S1_at
Gene name	peroxin Pex14
Homology with Arabidopsis	Similar to At4g22250: zinc finger (C3HC4-type RING finger) family protein (HF=9e-1)
Module size	27 genes
NF	0.35
%ile	36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	97.0	0.96	Zm.14107.1.S1_at	CK786818	peroxin Pex14	-	9e-1	At4g22250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.51	66.4	0.98	Zm.8582.1.A1_at	BM333994	-	-	1e+0	At3g59280	TXR1 (THAXTOMIN A RESISTANT 1)	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.1074.1.A1_at	CF631708	-	-	1e+0	At1g62940	ACOS5 (ACYL-COA SYNTHETASE 5)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	Zm.5364.1.S1_at	CF273142	-	-	9e-5	At3g09880	ATB' BETA	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	Zm.6139.1.A1_at	CA831794	-	-	5e+0	At4g01328	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.98	Zm.10745.1.A1_at	BQ539349	hypothetical protein LOC100272654	-	4e-3	At4g25990	CIL	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.98	Zm.3169.3.S1_at	CF628824	60S ribosomal protein L33-B	-	2e-9	At1g74270	60S ribosomal protein L35a (RPL35aC)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.34.5.A1_at	AI734535	-	-	4e-2	At2g36950	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.97	Zm.5754.1.A1_at	CF021134	metallothionein-like protein 1	-	7e-1	At1g07610	MT1C	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.9041.2.A1_at	BM335373	hypothetical protein LOC100272775	-	4e-111	At5g47880	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.16814.1.A1_at	CK368508	-	-	2e-14	At3g25840	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.8653.1.A1_at	BM075070	hypothetical protein LOC100276878	-	5e+0	At2g31335	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.5366.1.A1_at	AI621464	-	-	1e+0	At3g51880	HMGB1 (HIGH MOBILITY GROUP B 1)	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.97	Zm.7679.1.A1_at	BM079456	hypothetical protein LOC100273504	-	3e-12	At5g19820	emb2734 (embryo defective 2734)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.2529.1.A1_s_at	BQ539485	-	-	1e+0	At3g17240	mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.97	Zm.16854.1.S1_at	CF674957	hypothetical protein LOC100273231	-	1e-1	At3g18220	phosphatidic acid phosphatase family protein / PAP2 family protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.11077.1.A1_at	BM336854	-	-	2e+1	At4g03205	coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.897.1.A1_at	CD436499	-	-	7e-1	At5g03995	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.14057.2.A1_at	AF457961.1	-	-	8e-20	At4g22910	FZR2 (FIZZY-RELATED 2)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.4048.1.S1_at	AW091504	ras-related protein ARA-4	-	5e-35	At2g43130	ARA4	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.98	Zm.3094.1.S1_at	CK986065	-	-	7e-16	At1g03260	-	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.3892.4.A1_a_at	AF136828.1	elongation factor 1 alpha	-	3e-173	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.4271.2.A1_at	AY103821.1	Isoflavone reductase-like1	-	2e-20	At3g06720	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.5449.1.A1_at	CF636377	hypothetical protein LOC100273201	-	4e-1	At5g54600	50S ribosomal protein L24, chloroplast (CL24)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.4076.1.S1_at	BM266703	esterase	-	5e-2	At1g09390	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.17822.1.A1_at	CO521652	hypothetical protein LOC100193034	-	6e+0	At4g14104	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.98	Zm.19005.1.S1_at	CO522251	-	-	1e-1	At4g10620	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.4	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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