Co-expression analysis

Gene ID Zm.14075.1.A1_at
Gene name fiber protein Fb15
Homology with ArabidopsisSimilar to Atmg00050: - (HF=5e-1)
Module size 6 genes
NF 0.36
%ile 37.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.92Zm.14075.1.A1_atBG840438fiber protein Fb15-5e-1Atmg00050-O.I.H.G.S.X.
0.5065.70.95Zm.16892.1.A1_atCO520304calmodulin binding protein-2e-2At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.4455.70.92Zm.4605.1.A1_atAI795719--1e-4At1g64350SEH1HO.I.H.G.S.X.
0.4048.50.94Zm.15448.1.S1_atCD448349plastidic phosphate translocator-like protein1-4e-24At4g32390phosphate translocator-relatedO.I.H.G.S.X.
0.3641.30.95Zm.4795.2.A1_x_atAI740164--2e-1At4g28703-O.I.H.G.S.X.
0.104.60.93Zm.16498.1.S1_a_atAY103577.1hypothetical protein LOC100193260-1e-109At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.5GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
3.094.0GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
2.893.5GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.893.5GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.492.2GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
2.190.8GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.190.8GSM206326Upper pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.090.2GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.090.2GSM206327Upper pulvinus 30 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.090.2GSM258538DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4GSE10243Profiling expression changes caused by a segmental aneuploid in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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