Co-expression analysis

Gene ID	Zm.14026.1.S1_at
Gene name	hypothetical protein LOC100194188
Homology with Arabidopsis	Similar to At1g71830: SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1) (HF=4e-46)
Module size	6 genes
NF	0.56
%ile	74.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.14026.1.S1_at	AY104736.1	hypothetical protein LOC100194188	-	4e-46	At1g71830	SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.99	Zm.8097.1.A1_at	BM336868	-	-	2e+0	At3g21940	receptor protein kinase-related	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	Zm.12384.1.A1_at	AY111304.1	-	-	5e-4	At3g23340	ckl10 (Casein Kinase I-like 10)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.99	ZmAffx.281.1.A1_at	AI670409	-	-	3e+0	At5g46795	MSP2 (microspore-specific promoter 2)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.99	Zm.19161.1.S1_at	CF052905	-	-	2e-7	At1g14650	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.99	ZmAffx.1098.1.A1_at	AW126565	triacylglycerol lipase	-	3e+0	At1g71260	ATWHY2 (A. THALIANA WHIRLY 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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