Co-expression analysis

Gene ID	Zm.13937.1.S1_at
Gene name	mitochondrial import inner membrane translocase subunit Tim17
Homology with Arabidopsis	Similar to At2g37410: ATTIM17-2 (HF=6e-1)
Module size	13 genes
NF	0.55
%ile	71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.93	Zm.13937.1.S1_at	AY108141.1	mitochondrial import inner membrane translocase subunit Tim17	-	6e-1	At2g37410	ATTIM17-2	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.96	ZmAffx.406.8.A1_at	AI670243	-	-	2e-1	At5g06870	PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.96	Zm.9208.1.S1_at	AY104924.1	dTDP-4-dehydrorhamnose reductase	-	4e-11	At1g63000	NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE)	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.94	Zm.9867.1.A1_at	AY106142.1	hypothetical protein LOC100191196	-	7e-2	At1g23040	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.97	Zm.11923.1.S1_at	BM381883	hypothetical protein LOC100191414	-	6e-1	At4g03415	catalytic/ protein serine/threonine phosphatase	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.96	Zm.18259.1.A1_s_at	CN844705	B12D protein	-	2e+1	At5g45775	60S ribosomal protein L11 (RPL11D)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.17207.1.A1_at	CK370357	hypothetical protein LOC100192477	-	1e-4	At5g14850	mannosyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.96	Zm.4311.1.S1_at	AY105462.1	-	-	1e-31	At1g29880	glycyl-tRNA synthetase / glycine--tRNA ligase	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.95	Zm.11772.1.A1_at	CF624958	Hypothetical protein LOC100193089	-	5e+0	At5g38317	LCR58 (Low-molecular-weight cysteine-rich 58)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	ZmAffx.1128.1.S1_at	AW330583	-	-	8e-7	At4g24800	MA3 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.95	Zm.8697.1.A1_at	BM079294	IN2-1 protein	-	2e-6	At5g02790	In2-1 protein, putative	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.96	Zm.6930.1.A1_at	CK370820	hypothetical protein LOC100193485	-	3e-27	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.15296.1.S1_at	BQ538198	hypothetical protein LOC100279215	-	2e-1	At1g06590	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.1	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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