Co-expression analysis

Gene ID Zm.13912.1.A1_at
Gene name SBP-domain protein 7
Homology with ArabidopsisSimilar to At2g42200: SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9) (HF=1e-3)
Module size 8 genes
NF 0.31
%ile 28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4048.50.83Zm.13912.1.A1_atCO526719SBP-domain protein 7-1e-3At2g42200SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)O.I.H.G.S.X.
0.5369.10.87ZmAffx.331.1.A1_atAI670513--6e-1At4g26950unknown proteinO.I.H.G.S.X.
0.3336.00.86ZmAffx.323.1.S1_atAI670505--3e+0At5g06800myb family transcription factorO.I.H.G.S.X.
0.3233.40.84ZmAffx.378.1.A1_atAI673943--1e+1At5g54360zinc finger (C2H2 type) family protein-relatedO.I.H.G.S.X.
0.2622.70.86Zm.15074.1.A1_atCB885506--6e-35At5g65930ZWI (ZWICHEL)O.I.H.G.S.X.
0.2622.70.86ZmAffx.656.1.S1_atAI715084--8e-1At5g57310unknown proteinO.I.H.G.S.X.
0.2521.30.82ZmAffx.333.1.S1_atAI670518--3e+0At4g18760AtRLP51 (Receptor Like Protein 51)O.I.H.G.S.X.
0.2014.20.86Zm.6672.1.S1_atCF636709Blue copper protein-4e-1At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.899.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.899.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.699.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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