Co-expression analysis

Gene ID	Zm.13889.1.A1_x_at
Gene name	R2R3MYB-domain protein
Homology with Arabidopsis	Similar to At3g13540: ATMYB5 (MYB DOMAIN PROTEIN 5) (HF=2e-1)
Module size	6 genes
NF	0.61
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.97	Zm.13889.1.A1_x_at	AF099405.1	R2R3MYB-domain protein	-	2e-1	At3g13540	ATMYB5 (MYB DOMAIN PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.98	Zm.5288.1.S1_at	CA828006	-	-	2e+0	At1g11980	RUB3 (UBIQUITIN-RELATED PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	Zm.5165.1.A1_at	AI715001	gpm6 protein	-	5e+0	At5g03850	40S ribosomal protein S28 (RPS28B)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.5971.1.A1_at	AI665982	-	-	1e+1	At5g47320	RPS19 (RIBOSOMAL PROTEIN S19)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.3050.2.A1_at	CO523621	ras-related protein Rab-18	-	3e+0	At5g40700	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	Zm.9569.1.A1_at	AY103610.1	polyadenylate-binding protein 2	-	5e-7	At5g65260	polyadenylate-binding protein family protein / PABP family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.9	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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