Co-expression analysis

Gene ID Zm.13871.1.A1_at
Gene name R2R3MYB-domain protein
Homology with ArabidopsisSimilar to At1g08810: MYB60 (myb domain protein 60) (HF=2e-5)
Module size 7 genes
NF 0.51
%ile 66.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.97Zm.13871.1.A1_atAF099434.1R2R3MYB-domain protein-2e-5At1g08810MYB60 (myb domain protein 60)O.I.H.G.S.X.
0.6179.50.98Zm.19241.1.A1_atCO517742WW domain-containing oxidoreductase-6e+0At4g22160unknown proteinO.I.H.G.S.X.
0.5571.60.98Zm.2321.6.A1_atAI677502hypothetical protein LOC100277354-3e-3At3g28970AAR3 (antiauxin-resistant 3)O.I.H.G.S.X.
0.5065.70.98Zm.3486.2.A1_atAY111804.1--3e-1At5g52545unknown proteinO.I.H.G.S.X.
0.4048.50.98Zm.7564.1.A1_atBM078962--4e-1At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)O.I.H.G.S.X.
0.4048.50.98Zm.16306.1.A1_atAY111557.1hypothetical protein LOC100273693-2e+0At1g07140SIRANBPO.I.H.G.S.X.
0.3641.30.97Zm.11255.1.S1_atAY107659.1hypothetical protein LOC100217136-3e-32At5g40200DegP9 (DegP protease 9)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.999.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage