Co-expression analysis

Gene ID Zm.13863.1.S1_at
Gene name isocitrate lyase
Homology with ArabidopsisSimilar to At3g21720: ICL (ISOCITRATE LYASE) (HF=4e-9)
Module size 22 genes
NF 0.41
%ile 46.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8194.30.95Zm.13863.1.S1_atU69129.1isocitrate lyase-4e-9At3g21720ICL (ISOCITRATE LYASE)O.I.H.G.S.X.
0.6582.10.96Zm.16982.1.A1_atCF972418--3e-10At3g44340CEF (clone eighty-four)O.I.H.G.S.X.
0.6381.10.96Zm.3554.3.A1_atBM335933ribosomal protein L9, N-terminal domain containing protein-4e-1At5g53070ribosomal protein L9 family proteinO.I.H.G.S.X.
0.5875.10.97Zm.3358.2.S1_atAY105740.1--7e+0At2g44420protein N-terminal asparagine amidohydrolase family proteinO.I.H.G.S.X.
0.5674.40.97Zm.6149.1.A1_atCA399198omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-9e-1At5g43070WPP1 (WPP domain protein 1)O.I.H.G.S.X.
0.4961.90.97Zm.18351.1.S1_atCO529439--2e+0At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)O.I.H.G.S.X.
0.4861.30.97Zm.18352.1.S1_atCO527044glucan endo-1,3-beta-glucosidase, acidic isoform-1e+1At5g62470MYB96 (myb domain protein 96)O.I.H.G.S.X.
0.4556.40.96Zm.5165.1.A1_atAI715001gpm6 protein-5e+0At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.4455.70.96Zm.7826.2.A1_atAY107684.1--5e+0At4g22517-O.I.H.G.S.X.
0.4352.80.96Zm.7648.1.A1_atCO517814hypothetical protein LOC100191181-5e-7At5g40160EMB506 (embryo defective 506)O.I.H.G.S.X.
0.4149.70.98Zm.13016.1.A1_atCA403346hypothetical protein LOC100277160-2e+0At1g22160senescence-associated protein-relatedO.I.H.G.S.X.
0.4048.50.96Zm.13226.2.A1_atCF01290440S ribosomal protein S9-1e-41At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.4048.50.97Zm.5288.1.S1_atCA828006--2e+0At1g11980RUB3 (UBIQUITIN-RELATED PROTEIN 3)O.I.H.G.S.X.
0.3641.30.97Zm.6203.1.A1_x_atCN844626putative glutathione peroxidase-8e-50At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.H.G.S.X.
0.3336.00.97Zm.6606.1.A1_atAI467702hypothetical protein LOC100272956-8e-7At3g53500zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.2928.10.97Zm.1585.1.S1_atCO519290profilin 2-6e-16At4g29340PRF4 (PROFILIN 4)O.I.H.G.S.X.
0.2928.10.97Zm.14934.1.A1_atCK986163CHCH domain containing protein-1e+0At3g09032unknown proteinO.I.H.G.S.X.
0.2622.70.97Zm.12958.1.A1_atCA402421hypothetical protein LOC100217276-9e+0At5g43245unknown proteinO.I.H.G.S.X.
0.2419.80.97Zm.630.1.A1_atAF127022.1RNA polymerase2-1e-7At2g24120SCA3 (SCABRA 3)O.I.H.G.S.X.
0.2318.60.97Zm.9569.1.A1_atAY103610.1polyadenylate-binding protein 2-5e-7At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.2014.20.97Zm.1129.1.A1_atBE510577--1e+0At1g80730ZFP1 (ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.
0.136.80.97Zm.6096.1.A1_atCF636033hypothetical protein LOC100273833-6e-1At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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