Co-expression analysis

Gene ID Zm.13815.1.S1_at
Gene name Grx_C2.2 - glutaredoxin subgroup I
Homology with ArabidopsisSimilar to At5g63030: glutaredoxin, putative (HF=7e-3)
Module size 6 genes
NF 0.47
%ile 57.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4658.40.97Zm.13815.1.S1_atCF057002Grx_C2.2 - glutaredoxin subgroup I-7e-3At5g63030glutaredoxin, putativeO.I.H.G.S.X.
0.6179.50.97Zm.3885.1.S1_atCK145224Pectin methylesterase1-6e-2At3g06830pectinesterase family proteinO.I.H.G.S.X.
0.6077.80.98Zm.6975.1.S1_atAW066660hypothetical protein LOC100272316-4e-40At3g20050ATTCP-1O.I.H.G.S.X.
0.5571.60.98Zm.4560.2.S1_atAY106577.1--2e-11At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.3641.30.98Zm.14149.1.A1_atAY111524.1--1e+0At5g55135unknown proteinO.I.H.G.S.X.
0.2724.60.98Zm.8378.1.A1_atBM073885hypothetical protein LOC100273227-6e+0At3g26860-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5571.60.98Zm.16195.1.A1_atBM080827--7e-1At3g60270uclacyanin, putativeO.I.H.G.S.X.
0.5369.10.97Zm.3818.1.S1_atCF034965--2e-1At1g77570DNA binding / transcription factorO.I.H.G.S.X.
0.5065.70.95Zm.18476.1.S1_atCO530450--4e-3At4g36630EMB2754 (EMBRYO DEFECTIVE 2754)O.I.H.G.S.X.
0.4658.40.97Zm.17580.1.S1_atBM333532--2e+0At2g48070RPH1 (RESISTANCE TO PHYTOPHTHORA 1)O.I.H.G.S.X.
0.4455.70.95Zm.5748.1.A1_atAI649420hypothetical protein LOC100278320-8e-8At5g16960NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.4455.70.97Zm.2077.1.A1_atCA401374--1e-1At3g59820calcium-binding mitochondrial protein-relatedO.I.H.G.S.X.
0.4251.30.97Zm.8186.1.A1_atBM073199hypothetical protein LOC100191549-4e-8At5g17330GADO.I.H.G.S.X.
0.4048.50.95Zm.15454.1.A1_atCD448347hypothetical protein LOC100274941-5e+0At3g05860MADS-box protein (AGL45)O.I.H.G.S.X.
0.4048.50.96Zm.6391.1.A1_atAI738295hypothetical protein LOC100191443-4e-3At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.4048.50.96Zm.17194.1.A1_atBM380168--1e-3At5g44450methyltransferaseO.I.H.G.S.X.
0.4048.50.97Zm.13621.1.A1_atCF632782hypothetical protein LOC100191615-4e-10At2g17350unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.19107.1.A1_atBM332383hypothetical protein LOC100272386-8e-4At1g15030-O.I.H.G.S.X.
0.3641.30.96Zm.5718.1.A1_atBM336876hypothetical protein LOC100278767-6e+0At5g66005Expressed proteinO.I.H.G.S.X.
0.3641.30.98Zm.17630.1.A1_atCK348094--4e-1At1g06760histone H1, putativeO.I.H.G.S.X.
0.3538.90.96Zm.13574.1.S1_atAY107909.1--2e-12At3g17420GPK1O.I.H.G.S.X.
0.3538.90.97Zm.5185.1.A1_atAI711952hypothetical protein LOC100280305-1e-36At3g11945homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferaseO.I.H.G.S.X.
0.3336.00.97Zm.2922.1.A1_atCO532813--9e+0At4g21865unknown proteinO.I.H.G.S.X.
0.3336.00.98Zm.10162.1.A1_atAW155725--3e-1At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.
0.3233.40.97ZmAffx.738.1.S1_atAI740088--8e-1At3g03600RPS2 (RIBOSOMAL PROTEIN S2)O.I.H.G.S.X.
0.3233.40.94Zm.8993.1.A1_a_atAI649732hypothetical protein LOC100194128 /// hypothetical protein LOC100194385-2e-27At5g57655xylose isomerase family proteinO.I.H.G.S.X.
0.3233.40.95Zm.4285.3.A1_atCF273026Dual-specificity protein-like phosphatase 2-2e+0At3g53990universal stress protein (USP) family proteinO.I.H.G.S.X.
0.3233.40.97Zm.91.1.S1_atAY111773.1hypothetical protein LOC100192631-4e+0At4g23895pleckstrin homology (PH) domain-containing protein-relatedO.I.H.G.S.X.
0.3233.40.98Zm.2383.1.A1_atBG842498hypothetical protein LOC100275670-5e+0At2g13820protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3131.60.96Zm.428.1.S1_atAF077372.1hypothetical protein LOC100191335-8e-16At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.3131.60.98Zm.4278.1.A1_atAI834022hypothetical protein LOC100279402-1e+1At5g05550transcription factorO.I.H.G.S.X.
0.3029.80.96Zm.16176.1.A1_atBM380468hypothetical protein LOC100273104-1e+0At2g24800peroxidase, putativeO.I.H.G.S.X.
0.2928.10.97Zm.3504.1.A1_atBM073847chloroplast ribonuclease III domain protein-2e-2At4g37510ribonuclease III family proteinO.I.H.G.S.X.
0.2928.10.97Zm.17243.1.S1_atCK786707hypothetical protein LOC100192864-1e-27At1g30270CIPK23 (CBL-INTERACTING PROTEIN KINASE 23)O.I.H.G.S.X.
0.2928.10.97Zm.4530.1.A1_atCK827450hypothetical protein LOC100276667-1e-1At5g33898unknown proteinO.I.H.G.S.X.
0.2828.10.97Zm.9584.1.A1_atBM339549hypothetical protein LOC100276344-9e-2At5g63150unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.16176.1.A1_s_atBM380468hypothetical protein LOC100273104-1e+0At2g24800peroxidase, putativeO.I.H.G.S.X.
0.2724.60.97Zm.6398.2.A1_atAI881528--3e+0At2g40750WRKY54O.I.H.G.S.X.
0.2724.60.98Zm.12555.1.A1_x_atAI673922--4e+0At4g28170unknown proteinO.I.H.G.S.X.
0.2622.70.95Zm.3132.2.A1_atAY109250.1--4e-7At3g02510regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.
0.2521.30.94Zm.7988.1.A1_atBQ539266--1e+0At4g16600transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsO.I.H.G.S.X.
0.2521.30.96Zm.5574.1.A1_atCF636602--2e+0At1g01520myb family transcription factorO.I.H.G.S.X.
0.2521.30.96Zm.18349.1.A1_atCO532803--9e+0At4g11350transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.2521.30.96Zm.2559.1.A1_atBE639404NEDD8-activating enzyme E1 catalytic subunit-7e+0At3g28193unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.9711.1.A1_atCD998308--2e+0At5g62140unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.5218.1.A1_atAY111426.1--3e+0At2g30130ASL5O.I.H.G.S.X.
0.2521.30.97Zm.1544.3.A1_a_atBG874097hypothetical protein LOC100193254 /// hypothetical protein LOC100273641-2e-3At2g21160translocon-associated protein alpha (TRAP alpha) family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM205422Mo17xB73 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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