CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Zm.13815.1.S1_at

Gene name Grx_C2.2 - glutaredoxin subgroup I
Homology with Arabidopsis Similar to At5g63030: glutaredoxin, putative (HF=7e-3)

Module size 6 genes

NF 0.47

%ile 57.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.46 58.4 0.97 Zm.13815.1.S1_at CF057002 Grx_C2.2 - glutaredoxin subgroup I - 7e-3 At5g63030 glutaredoxin, putative O.I. H.G. S.X.
0.61 79.5 0.97 Zm.3885.1.S1_at CK145224 Pectin methylesterase1 - 6e-2 At3g06830 pectinesterase family protein O.I. H.G. S.X.
0.60 77.8 0.98 Zm.6975.1.S1_at AW066660 hypothetical protein LOC100272316 - 4e-40 At3g20050 ATTCP-1 O.I. H.G. S.X.
0.55 71.6 0.98 Zm.4560.2.S1_at AY106577.1 - - 2e-11 At3g59350 serine/threonine protein kinase, putative O.I. H.G. S.X.
0.36 41.3 0.98 Zm.14149.1.A1_at AY111524.1 - - 1e+0 At5g55135 unknown protein O.I. H.G. S.X.
0.27 24.6 0.98 Zm.8378.1.A1_at BM073885 hypothetical protein LOC100273227 - 6e+0 At3g26860 - O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.8 98.5 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9 98.2 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5 98.1 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3 98.0 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6 97.9 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5 97.8 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5 97.8 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1 97.7 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9 97.7 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2 96.9 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g63030, orthologous to the query gene, Zm.13815.1.S1_at

VF %ile Gene ID Repr. ID Gene Name Func. O.I. H.G. S.X. Other DB
0.67 81.6 At5g63030 836423 glutaredoxin, putative F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOPMFVA O.I. H.G. S.X.
0.55 70.6 At5g05320 830414 monooxygenase, putative (MO3) F:monooxygenase activity;P:metabolic process;C:cellular_component unknown;BFOPAM O.I. H.G. S.X.
0.50 65.3 At2g44890 819098 CYP704A1 member of CYP704A O.I. H.G. S.X.
0.09 2.8 At5g47810 834832 PFK2 (PHOSPHOFRUCTOKINASE 2) F:6-phosphofructokinase activity;P:glycolysis;C:cytosol, 6-phosphofructokinase complex;BOMFPAV O.I. H.G. S.X.
0.04 0.9 At1g48840 841306 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera

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