Co-expression analysis

Gene ID Zm.13808.2.A1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g03240: FH (FRATAXIN HOMOLOG) (HF=4e-7)
Module size 6 genes
NF 0.54
%ile 71.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.98Zm.13808.2.A1_a_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)O.I.H.G.S.X.
0.7792.10.98Zm.5548.2.A1_atCD4359642,3-bisphosphoglycerate-independent phosphoglycerate mutase-2e-60At1g097802,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putativeO.I.H.G.S.X.
0.6785.80.98Zm.13808.2.A1_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)O.I.H.G.S.X.
0.4352.80.98Zm.5715.1.A2_atBI542710O-methyltransferase ZRP4-3e+0At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)O.I.H.G.S.X.
0.4048.50.98Zm.11240.1.A1_atBM340894--1e+0At3g5954060S ribosomal protein L38 (RPL38B)O.I.H.G.S.X.
0.2521.30.98Zm.9411.1.S1_atCA827391SNF1-related protein kinase regulatory subunit beta-2-4e-1At4g26150CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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