Co-expression analysis

Gene ID	Zm.13729.1.S1_at
Gene name	anti-silencing protein 1
Homology with Arabidopsis	Similar to At5g38110: ASF1B (ANTI- SILENCING FUNCTION 1B) (HF=1e-20)
Module size	6 genes
NF	0.53
%ile	69.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.97	Zm.13729.1.S1_at	AY106251.1	anti-silencing protein 1	-	1e-20	At5g38110	ASF1B (ANTI- SILENCING FUNCTION 1B)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.14324.1.A1_at	AI391953	ribonucleoside-diphosphate reductase small chain	-	5e-26	At3g27060	TSO2 (TSO meaning 'ugly' in Chinese)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.12993.1.A1_at	CF632679	hypothetical protein LOC100273862	-	3e-2	At3g04380	SUVR4	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	Zm.9775.1.A1_at	BM338538	-	-	1e+0	At2g40880	ATCYSA (CYSTATIN A)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.17291.1.A1_at	CF637748	Zn-dependent hydrolases, including glyoxylases	-	2e-5	At4g33540	metallo-beta-lactamase family protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.9989.1.A1_at	BM332236	DNA binding protein	-	5e+0	At5g03090	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.7	98.9	GSM258186	B37xB73 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
11.1	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM258177	B37xB73 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
8.3	98.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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