Co-expression analysis

Gene ID Zm.13677.1.A1_at
Gene name 12-oxo-phytodienoic acid reductase
Homology with ArabidopsisSimilar to At1g06400: ARA-2 (HF=6e+0)
Module size 12 genes
NF 0.55
%ile 72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7590.80.98Zm.13677.1.A1_atCO51934812-oxo-phytodienoic acid reductase-6e+0At1g06400ARA-2O.I.H.G.S.X.
0.7590.80.98ZmAffx.1172.1.A1_atAW787638--5e+0At1g15165U-box domain-containing proteinO.I.H.G.S.X.
0.6785.80.99ZmAffx.820.1.S1_atAI770463hypothetical protein LOC100217195-8e-1At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.6481.70.99Zm.9670.2.A1_a_atAY110378.1--4e-4At1g60660CB5LP (CYTOCHROME B5-LIKE PROTEIN)O.I.H.G.S.X.
0.6179.50.98Zm.11655.1.A1_atBM379701Grx_C8 - glutaredoxin subgroup III-3e-17At3g02000ROXY1O.I.H.G.S.X.
0.5875.10.99ZmAffx.32.1.A1_s_atAI657422rhodopsin-like receptor-3e+0At1g12020unknown proteinO.I.H.G.S.X.
0.5065.70.99Zm.11764.1.A1_atAY109047.1GIR1 /// GIR1-1e+0At5g62210embryo-specific protein-relatedO.I.H.G.S.X.
0.4861.30.99Zm.18083.2.A1_atCK985909--1e-12At2g38670PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1)O.I.H.G.S.X.
0.4352.80.98ZmAffx.583.1.S1_atAI714946--3e+0At3g21338unknown proteinO.I.H.G.S.X.
0.4352.80.99Zm.127.1.A1_a_atBM332797octopine synthase binding factor1-1e-8At5g14760AO (L-ASPARTATE OXIDASE)O.I.H.G.S.X.
0.3844.20.98Zm.5147.1.A1_atCK787170--2e-25At5g36290unknown proteinO.I.H.G.S.X.
0.3641.30.98ZmAffx.1172.1.S1_atAW787638hypothetical protein LOC100273964-5e+0At1g15165U-box domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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