| Gene ID | Zm.1360.1.S1_x_at |
| Gene name | hypothetical protein LOC100276510 |
| Homology with Arabidopsis | Similar to At4g27890: nuclear movement family protein (HF=6e-1) |
| Module size | 6 genes |
| NF | 0.41 |
| %ile | 46.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.98 | Zm.1360.1.S1_x_at | AW927383 | hypothetical protein LOC100276510 | - | 6e-1 | At4g27890 | nuclear movement family protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.5064.1.S1_at | CA399210 | - | - | 2e-24 | At1g29880 | glycyl-tRNA synthetase / glycine--tRNA ligase | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.98 | Zm.2034.1.S1_at | BE123271 | hypothetical protein LOC100277458 | - | 1e+0 | At1g18800 | NRP2 (NAP1-RELATED PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.30 | 29.8 | 0.98 | Zm.39.1.S1_at | D87042.1 | Calcium-dependent protein kinase | - | 1e-25 | At4g35310 | CPK5 (calmodulin-domain protein kinase 5) | O.I. | H.G. | S.X. | |
| 0.27 | 24.6 | 0.98 | ZmAffx.963.1.A1_at | AI833792 | - | - | 8e-1 | At4g04620 | ATG8B (autophagy 8b) | O.I. | H.G. | S.X. | |
| 0.24 | 19.8 | 0.99 | Zm.13196.1.S1_at | AY105985.1 | t-snare | - | 6e-2 | At5g59210 | myosin heavy chain-related | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.5 | 97.8 | GSM258201 | Wf9 11-day seedling aerial tissue biological replicate 1 | GSE10237 | Gene expression variation among eight maize inbreds | |
| 6.4 | 97.5 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM258207 | Wf9 11-day seedling aerial tissue biological replicate 3 | GSE10237 | Gene expression variation among eight maize inbreds | |
| 5.7 | 97.2 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM258204 | Wf9 11-day seedling aerial tissue biological replicate 2 | GSE10237 | Gene expression variation among eight maize inbreds | |
| 4.8 | 96.6 | GSM258172 | B37 11-day seedling aerial tissue biological replicate 1 | GSE10236 | Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis | |
| 4.1 | 95.9 | GSM258181 | B37 11-day seedling aerial tissue biological replicate 2 | GSE10236 | Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis | |
| 4.0 | 95.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.4 | 94.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.56 | 78.6 | TaAffx.81223.1.S1_at | At4g27890 | - | - | 1e-2 | At2g47060 | serine/threonine protein kinase, putative | O.I. | H.G. | S.X. | |
| 0.64 | 83.6 | Ta.12382.3.S1_at | At4g27890 | - | - | 1e+0 | At3g18540 | unknown protein | O.I. | H.G. | S.X. | |
| 0.46 | 66.8 | TaAffx.38003.1.S1_at | At4g27890 | - | - | 1e+0 | At1g26220 | GCN5-related N-acetyltransferase (GNAT) family protein | O.I. | H.G. | S.X. | |
| 0.44 | 64.5 | Ta.4073.3.S1_at | At4g27890 | - | - | 2e-2 | At1g09500 | cinnamyl-alcohol dehydrogenase family / CAD family | O.I. | H.G. | S.X. | |
| 0.41 | 59.6 | TaAffx.26314.1.S1_at | At4g27890 | - | - | 1e+1 | Atmg00960 | - | O.I. | H.G. | S.X. | |
| 0.35 | 49.8 | TaAffx.109116.1.S1_at | At4g27890 | - | - | 3e-1 | At4g10490 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | O.I. | H.G. | S.X. | |
| 0.35 | 49.8 | TaAffx.78911.1.S1_at | At4g27890 | - | - | 4e+0 | At5g17130 | cysteine-type peptidase | O.I. | H.G. | S.X. | |
| 0.34 | 48.1 | TaAffx.109200.1.S1_at | At4g27890 | - | - | 2e+0 | At4g00390 | transcription regulator | O.I. | H.G. | S.X. | |
| 0.32 | 44.4 | TaAffx.28994.1.S1_at | At4g27890 | - | - | 3e-10 | At5g49830 | - | O.I. | H.G. | S.X. | |
| 0.20 | 24.0 | Ta.28493.1.S1_at | At4g27890 | - | - | 2e-1 | At3g17160 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage